RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 E9PAM4 449 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 M0R296 226 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 TBL1XO60907 577 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 ADH1CP00326 375 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 EGFP01133 1207 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 CD48P09326 243 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 ALADP13716 330 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 COMTP21964 271 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 CD70P32970 193 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 EIF2DP41214 584 aaKnown RBP10.91□□□□□ -0.66
LIG1-210ENST00000596332 PON2Q15165 354 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 DPYSL2Q16555 572 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 GEN1Q17RS7 908 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 ANO4Q32M45 955 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 EMC10Q5UCC4 262 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 PKN3Q6P5Z2 889 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 SND1Q7KZF4 910 aaKnown RBP eCLIP10.91□□□□□ -0.66
LIG1-210ENST00000596332 ADIPOR2Q86V24 386 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 CHSY1Q86X52 802 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 CCDC105Q8IYK2 499 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 CCAR2Q8N163 923 aaKnown RBP10.91□□□□□ -0.66
LIG1-210ENST00000596332 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.91□□□□□ -0.66
LIG1-210ENST00000596332 FIBINQ8TAL6 211 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 FAM3CQ92520 227 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 CLDN23Q96B33 292 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 TBC1D17Q9HA65 648 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 RBM12Q9NTZ6 932 aaKnown RBP10.91□□□□□ -0.66
LIG1-210ENST00000596332 C2orf42Q9NWW7 574 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 CWC15Q9P013 229 aaKnown RBP10.91□□□□□ -0.66
LIG1-210ENST00000596332 PPARGC1AQ9UBK2 798 aaKnown RBP10.91□□□□□ -0.66
LIG1-210ENST00000596332 SLC12A6Q9UHW9 1150 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 PYCARDQ9ULZ3 195 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 TBC1D30Q9Y2I9 924 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 PPP2R2CQ9Y2T4 447 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 CUL9Q8IWT3 2517 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 KIAA1549LQ6ZVL6 1849 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 WASH4PA8MWX3 477 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 GOLGA6L6A8MZA4 724 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 RNF8O76064 485 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 KIR2DL1P43626 348 aaPredicted RBP10.9□□□□□ -0.66
LIG1-210ENST00000596332 MARCKSL1P49006 195 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 HCAR3P49019 387 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 PEX5P50542 639 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 AIF1P55008 147 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 LMAN2Q12907 356 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 NR1H3Q13133 447 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 MTA1Q13330 715 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 TAZQ16635 292 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 SMTNL2Q2TAL5 461 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 BOLA3Q53S33 107 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 C11orf63Q6NUN7 778 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 POLNQ7Z5Q5 900 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 PSTKQ8IV42 348 aaKnown RBP10.9□□□□□ -0.66
LIG1-210ENST00000596332 APCDD1Q8J025 514 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 DDI1Q8WTU0 396 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 TEKT4Q8WW24 435 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 RAPGEF5Q92565 580 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 MYO19Q96H55 970 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 PNKPQ96T60 521 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 P2RY13Q9BPV8 354 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 SLC2A11Q9BYW1 496 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 PCDH18Q9HCL0 1135 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 CD248Q9HCU0 757 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 ETNK2Q9NVF9 386 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 STIM2Q9P246 746 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 AP4E1Q9UPM8 1137 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 MFHAS1Q9Y4C4 1052 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 CAPN6Q9Y6Q1 641 aa10.9□□□□□ -0.66
LIG1-210ENST00000596332 USP27XA6NNY8 438 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 TMEM110-MUSTN1A8MSY1 372 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 F5H5T6 163 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 MAN2B1O00754 1011 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 GPR37L1O60883 481 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 SRGAP2O75044 1071 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 LUC7L3O95232 432 aaKnown RBP10.89□□□□□ -0.67
LIG1-210ENST00000596332 KAT7O95251 611 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 MOCS3O95396 460 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 CD160O95971 181 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 GOT1P17174 413 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 MZF1P28698 734 aaPredicted RBP10.89□□□□□ -0.67
LIG1-210ENST00000596332 PLK1P53350 603 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 CDH4P55283 916 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 CCDC173Q0VFZ6 552 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 MMRN1Q13201 1228 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 DPYSQ14117 519 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 ARL13BQ3SXY8 428 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 FUT11Q495W5 492 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 LRRC38Q5VT99 294 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 AFMIDQ63HM1 303 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 ZNF852Q6ZMS4 543 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 CHST9Q7L1S5 443 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 NT5DC3Q86UY8 548 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 TP53INP2Q8IXH6 220 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 TERB1Q8NA31 727 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 HJURPQ8NCD3 748 aaPredicted RBP10.89□□□□□ -0.67
LIG1-210ENST00000596332 PJA1Q8NG27 643 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 KRT35Q92764 455 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 TTC17Q96AE7 1141 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 VOPP1Q96AW1 172 aa10.89□□□□□ -0.67
LIG1-210ENST00000596332 FAF2Q96CS3 445 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms