RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 MFHAS1Q9Y4C4 1052 aa17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 COL4A5P29400 1685 aa17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 SPDYE16A6NNV3 312 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 NEMP1O14524 444 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 MLNP12872 115 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 GP5P40197 560 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 RPL26P61254 145 aaKnown RBP17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 FLOT2Q14254 428 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 DPYSL2Q16555 572 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 CCDC153Q494R4 210 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 DCAF15Q66K64 600 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 SMYD5Q6GMV2 418 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 LRRC8BQ6P9F7 803 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 TCF7L2Q9NQB0 619 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 SYBUQ9NX95 663 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 HESX1Q9UBX0 185 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 KIAA1257Q9ULG3 409 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 LZTS1Q9Y250 596 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 PCDHB12Q9Y5F1 795 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 SIP14410 1827 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 MYO18AQ92614 2054 aaKnown RBP17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 CFLARO15519 480 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 TOMM70O94826 608 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 POLBP06746 335 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 MSX2P35548 267 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 TMEM132DQ14C87 1099 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 EPGNQ6UW88 154 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 ACOT1Q86TX2 421 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 EXOC8Q8IYI6 725 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 STK39Q9UEW8 545 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 APPL1Q9UKG1 709 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 PAPSS1O43252 624 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 IQCF3P0C7M6 154 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 PRDX6P30041 224 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 ATXN3P54252 364 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 SNAPC2Q13487 334 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 HSDL1Q3SXM5 330 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 EFCAB12Q6NXP0 572 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 SNX32Q86XE0 403 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 TDRD5Q8NAT2 981 aaKnown RBP17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 CCNYQ8ND76 341 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 ARNTL2Q8WYA1 636 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 OR52B2Q96RD2 323 aa17.82■□□□□ 0.44
ARHGEF1-213ENST00000595897 SRGAP2BP0DMP2 458 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 THRAP10827 490 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 MBTD1Q05BQ5 628 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 MARVELD2Q8N4S9 558 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 DCLK2Q8N568 766 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 MAPK15Q8TD08 544 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 DNAJC1Q96KC8 554 aaKnown RBP17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 CDRT15Q96T59 188 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 GRIP2Q9C0E4 1043 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 GGA3Q9NZ52 723 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 AP1G1O43747 822 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 DNAJA2O60884 412 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 F7P08709 466 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 SMIM18P0DKX4 95 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 GOT1P17174 413 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 ARL4AP40617 200 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 INCA1Q0VD86 236 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 NAB1Q13506 487 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 IYDQ6PHW0 289 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 SAMD7Q7Z3H4 446 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 TTC30AQ86WT1 665 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 PLD6Q8N2A8 252 aaKnown RBP17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 RNF148Q8N7C7 305 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 KYQ8NBH2 561 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 KHSRPQ92945 711 aaKnown RBP eCLIP17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 PRICKLE1Q96MT3 831 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 PGLYRP2Q96PD5 576 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 FERMT1Q9BQL6 677 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 NAT9Q9BTE0 207 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 WDR55Q9H6Y2 383 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 AP4B1Q9Y6B7 739 aa17.81■□□□□ 0.44
ARHGEF1-213ENST00000595897 ZBTB42B2RXF5 422 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 C19orf81C9J6K1 198 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 RNF103O00237 685 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 DENRO43583 198 aaKnown RBP17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 DGKIO75912 1065 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 ASLP04424 464 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 GTF2A2P52657 109 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 NCBP2-AS2Q69YL0 99 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 C16orf89Q6UX73 402 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 NAPRTQ6XQN6 538 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 C7orf31Q8N865 590 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 CHST13Q8NET6 341 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 CXorf38Q8TB03 319 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 CERS2Q96G23 380 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 CPB2Q96IY4 423 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 KCTD15Q96SI1 283 aaPredicted RBP17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 EPB41L1Q9H4G0 881 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 VRTNQ9H8Y1 702 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 COPS7BQ9H9Q2 264 aaPredicted RBP17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 DDX18Q9NVP1 670 aaKnown RBP17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 UBAP1Q9NZ09 502 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 PTTG2Q9NZH5 202 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 HACL1Q9UJ83 578 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 IGKV6-21A0A0C4DH24 114 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 KPNA7A9QM74 516 aa17.8■□□□□ 0.44
ARHGEF1-213ENST00000595897 TFAP2AP05549 437 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms