RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ZNF571Q7Z3V5 609 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 C14orf80Q86SX3 495 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 MFN1Q8IWA4 741 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 ZNF683Q8IZ20 524 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 AHI1Q8N157 1196 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 CARNMT1Q8N4J0 409 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 FRMD1Q8N878 549 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 WFIKKN2Q8TEU8 576 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 CYB5D2Q8WUJ1 264 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 RNF34Q969K3 372 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 IGSF8Q969P0 613 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 ZC3H10Q96K80 434 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 EDEM3Q9BZQ6 932 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 CIPCQ9C0C6 399 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 TKTL2Q9H0I9 626 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 DUSP15Q9H1R2 295 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 SLC6A17Q9H1V8 727 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 PARD6AQ9NPB6 346 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 CD93Q9NPY3 652 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 SEPT11Q9NVA2 429 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 ADAM22Q9P0K1 906 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 IFNKQ9P0W0 207 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 INVSQ9Y283 1065 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 SNX10Q9Y5X0 201 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 SPTBN2O15020 2390 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 ADAMTS9Q9P2N4 1935 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 CNOT1A5YKK6 2376 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 F5H5T6 163 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 NPC1O15118 1278 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 ALDH1A2O94788 518 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 F9P00740 461 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 CALB1P05937 261 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 NDUFV2P19404 249 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 RFC1P35251 1148 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 P2RY2P41231 377 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 ATP11AP98196 1134 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 C1QBPQ07021 282 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 AUHQ13825 339 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 ASIC2Q16515 512 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 C15orf59Q2T9L4 293 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 MAP7D1Q3KQU3 841 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 C5orf22Q49AR2 442 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 PPP1R15BQ5SWA1 713 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 SFMBT2Q5VUG0 894 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 HGSNATQ68CP4 663 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 MBLAC2Q68D91 279 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 ACAD10Q6JQN1 1059 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 CXorf57Q6NSI4 855 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 DNAAF5Q86Y56 855 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 APCDD1Q8J025 514 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 CCAR2Q8N163 923 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 C3orf20Q8ND61 904 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 OR52K2Q8NGK3 314 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 UCMAQ8WVF2 138 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 RXFP2Q8WXD0 754 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 RLN3Q8WXF3 142 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 TTC17Q96AE7 1141 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 MYO19Q96H55 970 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 XPO4Q9C0E2 1151 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 TMEM245Q9H330 911 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 TSPY26PQ9H489 355 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 HAUS4Q9H6D7 363 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 WDCPQ9H6R7 721 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 NCDNQ9UBB6 729 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 SLC12A6Q9UHW9 1150 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 MBD1Q9UIS9 605 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 VANGL2Q9ULK5 521 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 TP53BP1Q12888 1972 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 DOCK9Q9BZ29 2069 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 KNL1Q8NG31 2342 aa11.35□□□□□ -0.59
SHKBP1-206ENST00000595523 A0A1B0GVM2 712 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 A0A1W2PQJ5 194 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 TYW5A2RUC4 315 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 TCAF2A6NFQ2 919 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 DDX3XO00571 662 aaKnown RBP eCLIP11.34□□□□□ -0.593e-6■■■□□ 15.7
SHKBP1-206ENST00000595523 TIMM44O43615 452 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 CNTN5O94779 1100 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 GYPCP04921 128 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 RETP07949 1114 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 DLDP09622 509 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 CCDC172P0C7W6 258 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 KRT3P12035 628 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 SKILP12757 684 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 HLA-EP13747 358 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 PDGFRAP16234 1089 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 RRM1P23921 792 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 RDXP35241 583 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 CSKP41240 450 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 CTSOP43234 321 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 PTPN9P43378 593 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 COPAP53621 1224 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 HDAC4P56524 1084 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 RPL7AP62424 266 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 CDH18Q13634 790 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 PITRM1Q5JRX3 1037 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 RABGAP1LQ5R372 815 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 SDE2Q6IQ49 451 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 WDR59Q6PJI9 974 aa11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-206ENST00000595523 FAM131BQ86XD5 332 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms