RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 GARSP41250 739 aaKnown RBP12.27□□□□□ -0.44
NPC1-214ENST00000593280 TBX4P57082 545 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 COG7P83436 770 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 CDK16Q00536 496 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 DUSP4Q13115 394 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 EFTUD2Q15029 972 aaKnown RBP eCLIP12.27□□□□□ -0.44
NPC1-214ENST00000593280 RASA2Q15283 850 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 SPOUT1Q5T280 376 aaKnown RBP12.27□□□□□ -0.44
NPC1-214ENST00000593280 MANEALQ5VSG8 457 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 FBXO46Q6PJ61 603 aaPredicted RBP12.27□□□□□ -0.44
NPC1-214ENST00000593280 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 BCAS4Q8TDM0 211 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 CFAP36Q96G28 342 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 IGSF21Q96ID5 467 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 FCRL2Q96LA5 508 aaPredicted RBP12.27□□□□□ -0.44
NPC1-214ENST00000593280 CRISPLD1Q9H336 500 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 CATSPERBQ9H7T0 1116 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 CLIC5Q9NZA1 410 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 KLHL8Q9P2G9 620 aaPredicted RBP12.27□□□□□ -0.44
NPC1-214ENST00000593280 NEU3Q9UQ49 428 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 ACTL7BQ9Y614 415 aa12.27□□□□□ -0.44
NPC1-214ENST00000593280 SHROOM3Q8TF72 1996 aa12.27□□□□□ -0.45
NPC1-214ENST00000593280 ABHD14A-ACY1A0A1B0GW23 586 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 F5H423 210 aaPredicted RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 KCNK1O00180 336 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 APOEP02649 317 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 PTPN3P26045 913 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 PSMB4P28070 264 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 STX2P32856 288 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 MAGEA3P43357 314 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 GJA8P48165 433 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 NRG1Q02297 640 aaPredicted RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 EFEMP1Q12805 493 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 TAF10Q12962 218 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 LRRC26Q2I0M4 334 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 PARP6Q2NL67 630 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 SLC8B1Q6J4K2 584 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 KIAA1841Q6NSI8 718 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 ZNF534Q76KX8 674 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 SRRM1Q8IYB3 904 aaKnown RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 RNF168Q8IYW5 571 aaPredicted RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 AGGF1Q8N302 714 aaeCLIP12.26□□□□□ -0.45
NPC1-214ENST00000593280 MAML1Q92585 1016 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 ARMC5Q96C12 935 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 VWCEQ96DN2 955 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 CELF6Q96J87 481 aaKnown RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 XPO6Q96QU8 1125 aaKnown RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 CYTH2Q99418 400 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 VN1R3Q9BXE9 311 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 RABEP2Q9H5N1 569 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 PPANQ9NQ55 473 aaKnown RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 INTS9Q9NV88 658 aaKnown RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.26□□□□□ -0.45
NPC1-214ENST00000593280 IGSF9Q9P2J2 1179 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 ZC3H7BQ9UGR2 993 aaKnown RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 BACE2Q9Y5Z0 518 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 HS3ST4Q9Y661 456 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 TCRBV9S1A1TA0A576 114 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 TMEM120BA0PK00 339 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 WDR27A2RRH5 827 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 SLC38A8A6NNN8 435 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 FOXO6A8MYZ6 492 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 RASA4BC9J798 803 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 E9PAM4 449 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 ADAM12O43184 909 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 RASA4O43374 803 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 MLNP12872 115 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 BRAFP15056 766 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 KRT15P19012 456 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 TRIP4Q15650 581 aaPredicted RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 C10orf120Q5SQS8 335 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 ITPRIPL1Q6GPH6 555 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 PID1Q7Z2X4 250 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 ATPAF2Q8N5M1 289 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 LZTR1Q8N653 840 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 PDCD7Q8N8D1 485 aaKnown RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 GIPC2Q8TF65 315 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 DEPDC1BQ8WUY9 529 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 ATXN2LQ8WWM7 1075 aaKnown RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 TOP1MTQ969P6 601 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 MRRFQ96E11 262 aaKnown RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 SLC39A13Q96H72 371 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 PAWRQ96IZ0 340 aaKnown RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 CEP295NLQ96MC4 621 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 ZNF558Q96NG5 402 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 PAFAH2Q99487 392 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 KCNK9Q9NPC2 374 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 PRDM5Q9NQX1 630 aaPredicted RBP12.26□□□□□ -0.45
NPC1-214ENST00000593280 MARCH2Q9P0N8 246 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 SENP1Q9P0U3 644 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 RSPH14Q9UHP6 348 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 TRHDEQ9UKU6 1024 aa12.26□□□□□ -0.45
NPC1-214ENST00000593280 KIAA1671Q9BY89 1806 aa12.25□□□□□ -0.45
NPC1-214ENST00000593280 DFFAO00273 331 aa12.25□□□□□ -0.45
NPC1-214ENST00000593280 C2CD2LO14523 706 aa12.25□□□□□ -0.45
NPC1-214ENST00000593280 NDUFAB1O14561 156 aa12.25□□□□□ -0.45
NPC1-214ENST00000593280 GSTA2P09210 222 aa12.25□□□□□ -0.45
NPC1-214ENST00000593280 RPL17P18621 184 aaKnown RBP12.25□□□□□ -0.45
NPC1-214ENST00000593280 ATF6P18850 670 aa12.25□□□□□ -0.45
NPC1-214ENST00000593280 OR1D2P34982 312 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms