RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 NCBP2-AS2Q69YL0 99 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 POTEAQ6S8J7 498 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 ICA1LQ8NDH6 482 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 LMCD1Q9NZU5 365 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 PDLIM1O00151 329 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 ADCY6O43306 1168 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 MGAT1P26572 445 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 FOLH1Q04609 750 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 SNAPC2Q13487 334 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 TMEM132DQ14C87 1099 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 TCHHL1Q5QJ38 904 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 EFCAB12Q6NXP0 572 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 MARVELD2Q8N4S9 558 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 TRAPPC12Q8WVT3 735 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 KCTD15Q96SI1 283 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 C6orf203Q9P0P8 240 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 PSMD13Q9UNM6 376 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 AP4E1Q9UPM8 1137 aa15.24■□□□□ 0.03
SMARCA4-219ENST00000592604 DCXO43602 365 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 ZBTB14O43829 449 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 GP5P40197 560 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 SNX16P57768 344 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 POU5F1BQ06416 359 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 FBXL19Q6PCT2 694 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 COLGALT1Q8NBJ5 622 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 HIPK4Q8NE63 616 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 MAGEB5Q9BZ81 275 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 ZCWPW1Q9H0M4 648 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 CDH19Q9H159 772 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 COG4Q9H9E3 785 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 BLOC1S6Q9UL45 172 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 ATP9BO43861 1147 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 ARIH2O95376 493 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 RPS12P25398 132 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 AMHR2Q16671 573 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 GRTP1Q5TC63 336 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 LBX2Q6XYB7 198 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 SAMD7Q7Z3H4 446 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 TMEM165Q9HC07 324 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 DPP3Q9NY33 737 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 ADAM28Q9UKQ2 775 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 USP3Q9Y6I4 520 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 DPEP1P16444 411 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 GARSP41250 739 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 ALDH1A3P47895 512 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 CLCN2P51788 898 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 CLCN3P51790 818 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 SESN2P58004 480 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 PEX6Q13608 980 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 TMC7Q7Z402 723 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 RIOX2Q8IUF8 465 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 ARL10Q8N8L6 244 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 EZH1Q92800 747 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 OPTNQ96CV9 577 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 CPNE1Q99829 537 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 B3GNT5Q9BYG0 378 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 PDZD7Q9H5P4 517 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 GGA3Q9NZ52 723 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 STK39Q9UEW8 545 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 INPP5FQ9Y2H2 1132 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 DTNAQ9Y4J8 743 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 NR2E3Q9Y5X4 410 aa15.23■□□□□ 0.03
SMARCA4-219ENST00000592604 A0A0G2JMZ2 1700 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 LRRC37A2A6NM11 1700 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 SMIM18P0DKX4 95 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 GLDCP23378 1020 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 KYAT1Q16773 422 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 CELF3Q5SZQ8 465 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 EEPD1Q7L9B9 569 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 TMEM126BQ8IUX1 230 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 PQLC1Q8N2U9 271 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 EFCAB3Q8N7B9 438 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 RNPEPQ9H4A4 650 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 ZNF358Q9NW07 568 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 PRPF19Q9UMS4 504 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 FZD1Q9UP38 647 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 C15orf38-AP3S2A0A0A6YYH1 394 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 RBM47A0AV96 593 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 TMEM114B3SHH9 223 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 ZMPSTE24O75844 475 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 FBXO21O94952 628 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 SLC26A2P50443 739 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 ATXN1P54253 815 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 GRAMD1BQ3KR37 738 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 SLC9B1Q4ZJI4 515 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 SLC26A9Q7LBE3 791 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 ARPINQ7Z6K5 226 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 SATL1Q86VE3 508 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 ZNF781Q8N8C0 355 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 JDP2Q8WYK2 163 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 DGCR14Q96DF8 476 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 SNX15Q9NRS6 342 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 SYBUQ9NX95 663 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 TXNDC16Q9P2K2 825 aa15.22■□□□□ 0.03
SMARCA4-219ENST00000592604 SCN4AP35499 1836 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 NOP56O00567 594 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 HBP1O60381 514 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 POLBP06746 335 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 ETS2P15036 469 aa15.21■□□□□ 0.03
SMARCA4-219ENST00000592604 USP4Q13107 963 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms