RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TTC17Q96AE7 1141 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 HDAC11Q96DB2 347 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 SUSD3Q96L08 255 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 TKTL2Q9H0I9 626 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 ALG13Q9NP73 1137 aaKnown RBP16.18■□□□□ 0.18
MBD1-227ENST00000592060 TRMT13Q9NUP7 481 aaKnown RBP16.18■□□□□ 0.18
MBD1-227ENST00000592060 SYBUQ9NX95 663 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 PLLPQ9Y342 182 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 KCNK1O00180 336 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 C2CD2LO14523 706 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 NCAM2O15394 837 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
MBD1-227ENST00000592060 SKIP12755 728 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 NQO1P15559 274 aaKnown RBP16.18■□□□□ 0.18
MBD1-227ENST00000592060 SESN2P58004 480 aaPredicted RBP16.18■□□□□ 0.18
MBD1-227ENST00000592060 EIF4EBP2Q13542 120 aaPredicted RBP16.18■□□□□ 0.18
MBD1-227ENST00000592060 CRYMQ14894 314 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 FYB2Q5VWT5 728 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 OVOS1Q6IE37 1185 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 PARP9Q8IXQ6 854 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 DQX1Q8TE96 717 aaKnown RBP16.18■□□□□ 0.18
MBD1-227ENST00000592060 EPAS1Q99814 870 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 BRD8Q9H0E9 1235 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 WDCPQ9H6R7 721 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 NPHS2Q9NP85 383 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 PIH1D1Q9NWS0 290 aaKnown RBP16.18■□□□□ 0.18
MBD1-227ENST00000592060 KLHL8Q9P2G9 620 aaPredicted RBP16.18■□□□□ 0.18
MBD1-227ENST00000592060 NEU3Q9UQ49 428 aa16.18■□□□□ 0.18
MBD1-227ENST00000592060 F8W810 466 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 KLF11O14901 512 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 HGSO14964 777 aaPredicted RBP16.17■□□□□ 0.18
MBD1-227ENST00000592060 DCTN3O75935 186 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 LRIG2O94898 1065 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 ELNP15502 786 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 TYMPP19971 482 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 BGNP21810 368 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 CNTFP26441 200 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 KCNJ2P63252 427 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 ITGA7Q13683 1181 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 PLEKHG4Q58EX7 1191 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 PID1Q7Z2X4 250 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 TBC1D1Q86TI0 1168 aaPredicted RBP16.17■□□□□ 0.18
MBD1-227ENST00000592060 SMC1BQ8NDV3 1235 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 DPF3Q92784 378 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 ERP27Q96DN0 273 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 NAT9Q9BTE0 207 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 TSSK1BQ9BXA7 367 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 SQORQ9Y6N5 450 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 UNC5CO95185 931 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 AP2A1O95782 977 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 TROVE2P10155 538 aaKnown RBP eCLIP16.17■□□□□ 0.18
MBD1-227ENST00000592060 NAB1Q13506 487 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 SETDB1Q15047 1291 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 CASC4Q6P4E1 433 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 DCLRE1AQ6PJP8 1040 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 PCSK9Q8NBP7 692 aaKnown RBP16.17■□□□□ 0.18
MBD1-227ENST00000592060 RFWD2Q8NHY2 731 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 IQCGQ9H095 443 aaKnown RBP16.17■□□□□ 0.18
MBD1-227ENST00000592060 GBA3Q9H227 469 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 ARHGEF3Q9NR81 526 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 TMEM51Q9NW97 253 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 SLC17A6Q9P2U8 582 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 OR12D3Q9UGF7 316 aa16.17■□□□□ 0.18
MBD1-227ENST00000592060 PLXNA3P51805 1871 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 B4GALT3O60512 393 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 MX2P20592 715 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 ALDH3A1P30838 453 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 CD68P34810 354 aaPredicted RBP16.16■□□□□ 0.18
MBD1-227ENST00000592060 GARSP41250 739 aaKnown RBP16.16■□□□□ 0.18
MBD1-227ENST00000592060 OVGP1Q12889 678 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 ZBTB17Q13105 803 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 MAPRE1Q15691 268 aaKnown RBP16.16■□□□□ 0.18
MBD1-227ENST00000592060 SPDYAQ5MJ70 313 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 MROH9Q5TGP6 573 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 KCTD11Q693B1 232 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 PACS1Q6VY07 963 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 NLRP9Q7RTR0 991 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 THEM5Q8N1Q8 247 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 SCAMP5Q8TAC9 235 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 LRRC37BQ96QE4 947 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 TRIM62Q9BVG3 475 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 OSBPL2Q9H1P3 480 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 PCMTD2Q9NV79 361 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 ABT1Q9ULW3 272 aaKnown RBP16.16■□□□□ 0.18
MBD1-227ENST00000592060 PCDHB8Q9UN66 801 aa16.16■□□□□ 0.18
MBD1-227ENST00000592060 NUP205Q92621 2012 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 ZBTB24O43167 697 aaPredicted RBP16.15■□□□□ 0.18
MBD1-227ENST00000592060 IRAK2O43187 625 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 MTSS1O43312 755 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 TGDSO95455 350 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 CRHR1P34998 444 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 SERPINB6P35237 376 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 TSPY1Q01534 308 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 OLIG2Q13516 323 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 TRAF7Q6Q0C0 670 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 KLHL29Q96CT2 875 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 MLPHQ9BV36 600 aaPredicted RBP16.15■□□□□ 0.18
MBD1-227ENST00000592060 CASS4Q9NQ75 786 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 TXLNGQ9NUQ3 528 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 ARHGEF38Q9NXL2 777 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms