RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 XPO4Q9C0E2 1151 aaKnown RBP10.41□□□□□ -0.74
BRCA1-227ENST00000591849 EPC1Q9H2F5 836 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 PIGVQ9NUD9 493 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 ZNHIT6Q9NWK9 470 aaKnown RBP10.41□□□□□ -0.74
BRCA1-227ENST00000591849 THAP10Q9P2Z0 257 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-227ENST00000591849 VANGL2Q9ULK5 521 aa10.41□□□□□ -0.74
BRCA1-227ENST00000591849 KIF26AQ9ULI4 1882 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 A0A1B0GVM2 712 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 A0A1W2PQJ5 194 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 TCAF2A6NFQ2 919 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 SIGLEC16A6NMB1 481 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 WASH3PC4AMC7 463 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 SRGAP2O75044 1071 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 ADAM23O75077 832 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 LUC7L3O95232 432 aaKnown RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 GJB6O95452 261 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 FTLP02792 175 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 ASLP04424 464 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 EPHX1P07099 455 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 DLDP09622 509 aaKnown RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 TFE3P19532 575 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 GPD1P21695 349 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 CD70P32970 193 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 NNMTP40261 264 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 LMAN2Q12907 356 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 AUHQ13825 339 aaKnown RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 ZNF234Q14588 700 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 ACBD5Q5T8D3 534 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 LAIR1Q6GTX8 287 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 FBXL22Q6P050 247 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 SCYL2Q6P3W7 929 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 ZNF571Q7Z3V5 609 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 C11orf74Q86VG3 221 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 CIR1Q86X95 450 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 FAM131BQ86XD5 332 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 CCAR2Q8N163 923 aaKnown RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 SUMF1Q8NBK3 374 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 C3orf20Q8ND61 904 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 JOSD2Q8TAC2 188 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 MYEOVQ96EZ4 313 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 PGAP3Q96FM1 320 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 P2RY11Q96G91 374 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 VCPIP1Q96JH7 1222 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 PRICKLE1Q96MT3 831 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-227ENST00000591849 GABRG3Q99928 467 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 ARHGEF38Q9NXL2 777 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 SUN2Q9UH99 717 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 CAPN11Q9UMQ6 739 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 RAD54BQ9Y620 910 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 HS3ST4Q9Y661 456 aa10.4□□□□□ -0.74
BRCA1-227ENST00000591849 MYOFQ9NZM1 2061 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 DCLK1O15075 740 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 RTN2O75298 545 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 CLDN11O75508 207 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 SERPING1P05155 500 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 ACADMP11310 421 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 GZMAP12544 262 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 RFC1P35251 1148 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-227ENST00000591849 GGCXP38435 758 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 PBX1P40424 430 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 CSKP41240 450 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 PRKCIP41743 596 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 IL12RB1P42701 662 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 PTPN9P43378 593 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 ID4P47928 161 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 ATXN1P54253 815 aaKnown RBP10.39□□□□□ -0.75
BRCA1-227ENST00000591849 PTP4A2Q12974 167 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 EIF4EBP2Q13542 120 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-227ENST00000591849 SLC12A1Q13621 1099 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 TRIM14Q14142 442 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 C15orf59Q2T9L4 293 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-227ENST00000591849 CCDC14Q49A88 953 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 TMEM215Q68D42 235 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 WDR59Q6PJI9 974 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 MON1BQ7L1V2 547 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 C14orf80Q86SX3 495 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 RASSF3Q86WH2 238 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.39□□□□□ -0.75
BRCA1-227ENST00000591849 MDGA1Q8NFP4 955 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 WFDC5Q8TCV5 224 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 FAM172AQ8WUF8 416 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 RLN3Q8WXF3 142 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 SYN2Q92777 582 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-227ENST00000591849 NT5C3BQ969T7 300 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 TRIM11Q96F44 468 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 MCEEQ96PE7 176 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 HAPLN3Q96S86 360 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 TTYH3Q9C0H2 523 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 MUC3BQ9H195 1237 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 PARVAQ9NVD7 372 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 TAS2R14Q9NYV8 317 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 MYO1AQ9UBC5 1043 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 HCN2Q9UL51 889 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 USP18Q9UMW8 372 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 SNX10Q9Y5X0 201 aa10.39□□□□□ -0.75
BRCA1-227ENST00000591849 ATG2BQ96BY7 2078 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 C2CD4BA6NLJ0 364 aa10.38□□□□□ -0.75
BRCA1-227ENST00000591849 DDX3XO00571 662 aaKnown RBP eCLIP10.38□□□□□ -0.751e-8■■■□□ 17.6
BRCA1-227ENST00000591849 NDUFS2O75306 463 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms