RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	PTPRB	P23467	1997 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	METTL12	A8MUP2	240 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107		O00370	1275 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	CETN3	O15182	167 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	CBFA2T3	O75081	653 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	BRD2	P25440	801 aa	Known RBP	13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	GCGR	P47871	477 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	LRRC63	Q05C16	580 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	EIF4H	Q15056	248 aa	Known RBP	13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	ZNF423	Q2M1K9	1284 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	HLA-B	Q31612	363 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	MPPE1	Q53F39	396 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	CCDC157	Q569K6	752 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	KCNT1	Q5JUK3	1230 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	BSPRY	Q5W0U4	402 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	PM20D1	Q6GTS8	502 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	ADIPOR2	Q86V24	386 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	OR2T3	Q8NH03	318 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	RNF139	Q8WU17	664 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	TM7SF3	Q9NS93	570 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	SAMSN1	Q9NSI8	373 aa	Known RBP	13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	STIM2	Q9P246	746 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	GGA2	Q9UJY4	613 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107	NBEA	Q8NFP9	2946 aa		13.78	□□□□□ -0.2
NPC1-212	ENST00000591107		M0QYV0	167 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	TBL1X	O60907	577 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	FSBP	O95073	299 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	ATXN1L	P0C7T5	689 aa	Known RBP	13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	PABPC1	P11940	636 aa	Known RBP	13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	MATK	P42679	507 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	HARS2	P49590	506 aa	Known RBP	13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	CLDN6	P56747	220 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	DAOA	P59103	153 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	LSM11	P83369	360 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	CAMK2G	Q13555	558 aa	Predicted RBP	13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	KIF19	Q2TAC6	998 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	TUSC1	Q2TAM9	212 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	HSP90AA4P	Q58FG1	418 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	MBLAC2	Q68D91	279 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	NADSYN1	Q6IA69	706 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	FOXR2	Q6PJQ5	311 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	MMS22L	Q6ZRQ5	1243 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	PROSER1	Q86XN7	944 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	C1orf216	Q8TAB5	229 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	ADAMTS14	Q8WXS8	1223 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	SRRT	Q9BXP5	876 aa	Known RBP	13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	HSD3B7	Q9H2F3	369 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	TMEM245	Q9H330	911 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	PRSS16	Q9NQE7	514 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	TOR4A	Q9NXH8	423 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	BAHCC1	Q9P281	2608 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	HESX1	Q9UBX0	185 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	SERGEF	Q9UGK8	458 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	SNX11	Q9Y5W9	270 aa		13.77	□□□□□ -0.21
NPC1-212	ENST00000591107	FAM149A	A5PLN7	773 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	FAM47DP	A6NHR8	397 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107		H0Y626	953 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	TRIM16	O95361	564 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	IGLV3-19	P01714	112 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	CAPNS1	P04632	268 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	SLC8A3	P57103	927 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	RPS14	P62263	151 aa	Known RBP	13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	ENPEP	Q07075	957 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	FAM133B	Q5BKY9	247 aa	Known RBP	13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	CDKAL1	Q5VV42	579 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	PMF1	Q6P1K2	205 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	TMEM270	Q6UE05	265 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	CADM4	Q8NFZ8	388 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	ADAM32	Q8TC27	787 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	SLC35C1	Q96A29	364 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	NUP58	Q9BVL2	599 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	DNAI2	Q9GZS0	605 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	MIS12	Q9H081	205 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	THAP9	Q9H5L6	903 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	TM9SF3	Q9HD45	589 aa		13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	XPO7	Q9UIA9	1087 aa	Known RBP	13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	HBS1L	Q9Y450	684 aa	Known RBP	13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.76	□□□□□ -0.21
NPC1-212	ENST00000591107	ATRX	P46100	2492 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	ADAMTS20	P59510	1910 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	RNF225	M0QZC1	329 aa	Predicted RBP	13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	NPC1	O15118	1278 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	SLC16A3	O15427	465 aa	Known RBP	13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	STX10	O60499	249 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	FGFR1OP	O95684	399 aa	Known RBP	13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	SEMA4F	O95754	770 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	CER1	O95813	267 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	MOCS2	O96007	188 aa	Predicted RBP	13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	ATP1A3	P13637	1013 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	ZNF18	P17022	549 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	OXTR	P30559	389 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	CTSO	P43234	321 aa	Predicted RBP	13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	RPS24	P62847	133 aa	Known RBP	13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	SLC14A1	Q13336	389 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	PKDCC	Q504Y2	493 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	PRAMEF14	Q5SWL7	426 aa		13.75	□□□□□ -0.21
NPC1-212	ENST00000591107	ARHGEF19	Q8IW93	802 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms