RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 MAGEB5Q9BZ81 275 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 TKTL2Q9H0I9 626 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 ADAM22Q9P0K1 906 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 NCDNQ9UBB6 729 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 STAP1Q9ULZ2 295 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 GVINP1Q7Z2Y8 2422 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 F5H5T6 163 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 CAVIN2O95810 425 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 RETP07949 1114 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 ABCB4P21439 1286 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 RFC1P35251 1148 aaPredicted RBP18.83■□□□□ 0.6
DDX39A-212ENST00000590260 PRKCIP41743 596 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 CTSOP43234 321 aaPredicted RBP18.83■□□□□ 0.6
DDX39A-212ENST00000590260 NSFP46459 744 aaKnown RBP18.83■□□□□ 0.6
DDX39A-212ENST00000590260 NUMBP49757 651 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 DEUP1Q05D60 604 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 FIGNQ5HY92 759 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 PPP1R15BQ5SWA1 713 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 KIAA2013Q8IYS2 634 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 CCAR2Q8N163 923 aaKnown RBP18.83■□□□□ 0.6
DDX39A-212ENST00000590260 MSANTD4Q8NCY6 345 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 RXFP2Q8WXD0 754 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 RNF34Q969K3 372 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 TTC17Q96AE7 1141 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 ALG14Q96F25 216 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 MKRN2Q9H000 416 aaKnown RBP18.83■□□□□ 0.6
DDX39A-212ENST00000590260 MTG2Q9H4K7 406 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 HAUS4Q9H6D7 363 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 VANGL2Q9ULK5 521 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 FAM186AA6NE01 2351 aa18.83■□□□□ 0.6
DDX39A-212ENST00000590260 RIF1Q5UIP0 2472 aaKnown RBP18.82■□□□□ 0.6
DDX39A-212ENST00000590260 CNTN5O94779 1100 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 ALDH1A2O94788 518 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 EPN2O95208 641 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 SKILP12757 684 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 MZF1P28698 734 aaPredicted RBP18.82■□□□□ 0.6
DDX39A-212ENST00000590260 UBASH3AP57075 661 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 ATP11AP98196 1134 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 SPEM2Q0P670 501 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 ALFQ53S48 1182 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 PITRM1Q5JRX3 1037 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 BRMS1LQ5PSV4 323 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 HGSNATQ68CP4 663 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 PMS2CLQ68D20 193 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 ACAD10Q6JQN1 1059 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.82■□□□□ 0.6
DDX39A-212ENST00000590260 FAM131BQ86XD5 332 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 MCOLN2Q8IZK6 566 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 C3orf20Q8ND61 904 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 SIK2Q9H0K1 926 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 WDCPQ9H6R7 721 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 IFNKQ9P0W0 207 aa18.82■□□□□ 0.6
DDX39A-212ENST00000590260 BCCIPQ9P287 314 aaKnown RBP eCLIP18.82■□□□□ 0.6
DDX39A-212ENST00000590260 NYNRINQ9P2P1 1898 aaKnown RBP18.82■□□□□ 0.6
DDX39A-212ENST00000590260 SPAG17Q6Q759 2223 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 EP300Q09472 2414 aaPredicted RBP18.81■□□□□ 0.6
DDX39A-212ENST00000590260 DDX3XO00571 662 aaKnown RBP eCLIP18.81■□□□□ 0.6
DDX39A-212ENST00000590260 NPC1O15118 1278 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 TIMM44O43615 452 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 DLDP09622 509 aaKnown RBP18.81■□□□□ 0.6
DDX39A-212ENST00000590260 C7P10643 843 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 CSKP41240 450 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 C1QBPQ07021 282 aaKnown RBP18.81■□□□□ 0.6
DDX39A-212ENST00000590260 CCDC6Q16204 474 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 ASIC2Q16515 512 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 USP39Q53GS9 565 aaKnown RBP18.81■□□□□ 0.6
DDX39A-212ENST00000590260 SDE2Q6IQ49 451 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 WDR59Q6PJI9 974 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 LRSAM1Q6UWE0 723 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 ABCA7Q8IZY2 2146 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 UCMAQ8WVF2 138 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 CENPIQ92674 756 aaPredicted RBP18.81■□□□□ 0.6
DDX39A-212ENST00000590260 HINFPQ9BQA5 517 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 EDEM3Q9BZQ6 932 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 ARRDC1-AS1Q9H2J1 176 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 SEPT11Q9NVA2 429 aaKnown RBP18.81■□□□□ 0.6
DDX39A-212ENST00000590260 ZNF212Q9UDV6 495 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 SLC12A6Q9UHW9 1150 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 RAB23Q9ULC3 237 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 OR51B4Q9Y5P0 310 aa18.81■□□□□ 0.6
DDX39A-212ENST00000590260 IGHV1OR15-9A0A0B4J2B8 117 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 A0A1B0GVM2 712 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 A0A1W2PQJ5 194 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 TCAF2A6NFQ2 919 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 H0Y626 953 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 GOLGA6L19H0YKK7 550 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 EPHX1P07099 455 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 PDGFRAP16234 1089 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 RRM1P23921 792 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 RDXP35241 583 aaKnown RBP18.8■□□□□ 0.6
DDX39A-212ENST00000590260 PTPN9P43378 593 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 HDAC4P56524 1084 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 RPL7AP62424 266 aaKnown RBP18.8■□□□□ 0.6
DDX39A-212ENST00000590260 OGDHQ02218 1023 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 CAMK2GQ13555 558 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-212ENST00000590260 CDH18Q13634 790 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 PLEKHG6Q3KR16 790 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 SFMBT2Q5VUG0 894 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 PGBD3Q8N328 593 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 LOXL4Q96JB6 756 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms