RNA–Protein interactions for RNA: ENST00000589934.1

APBA3-204, Transcript of amyloid beta precursor protein binding family A member 3, human

TSL 2

Gene APBA3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBA3-204	ENST00000589934	PENK	P01210	267 aa	Predicted RBP	13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	KRT10	P13645	584 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	TCP1	P17987	556 aa	Known RBP	13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	ERCC2	P18074	760 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	AMPD1	P23109	780 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	RPS24	P62847	133 aa	Known RBP	13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	MPP7	Q5T2T1	576 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	FYB2	Q5VWT5	728 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	AFMID	Q63HM1	303 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	RHBDF2	Q6PJF5	856 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	CHSY1	Q86X52	802 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	TMEM25	Q86YD3	366 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	MAP7D3	Q8IWC1	876 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	LGI2	Q8N0V4	545 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	PLD5	Q8N7P1	536 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	ACTRT1	Q8TDG2	376 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	MS4A14	Q96JA4	679 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	NOL6	Q9H6R4	1146 aa	Known RBP	13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	HPS4	Q9NQG7	708 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	NDFIP2	Q9NV92	336 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	MPP6	Q9NZW5	540 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	NR2E1	Q9Y466	385 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	MFHAS1	Q9Y4C4	1052 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934	NUMBL	Q9Y6R0	609 aa		13.62	□□□□□ -0.23
APBA3-204	ENST00000589934		H3BRJ5	948 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	CREB3	O43889	395 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	RHOQ	P17081	205 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	PSMC3	P17980	439 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	CHKA	P35790	457 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	VCP	P55072	806 aa	Known RBP	13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	SLC10A2	Q12908	348 aa	Predicted RBP	13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	KRT81	Q14533	505 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	LLGL1	Q15334	1064 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	NCBP2-AS2	Q69YL0	99 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	TRIM68	Q6AZZ1	485 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	BBS12	Q6ZW61	710 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	MTSS1L	Q765P7	747 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	CFAP52	Q8N1V2	620 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	NPW	Q8N729	165 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	OR52K2	Q8NGK3	314 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	DEPDC1B	Q8WUY9	529 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	RSAD2	Q8WXG1	361 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	IRF7	Q92985	503 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	TBC1D31	Q96DN5	1066 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	CHFR	Q96EP1	664 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	ZFYVE19	Q96K21	471 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	EPAS1	Q99814	870 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	DDX50	Q9BQ39	737 aa	Known RBP	13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	KXD1	Q9BQD3	176 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	CALN1	Q9BXU9	219 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	ZYG11B	Q9C0D3	744 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	RETREG1	Q9H6L5	497 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	PRDM16	Q9HAZ2	1276 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	TMEM248	Q9NWD8	314 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	FBXO10	Q9UK96	956 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	CLEC4E	Q9ULY5	219 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934	TBC1D30	Q9Y2I9	924 aa		13.61	□□□□□ -0.23
APBA3-204	ENST00000589934		F5H5T6	163 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	SLC9A3R1	O14745	358 aa	Predicted RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	CEP104	O60308	925 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	CYP17A1	P05093	508 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	ARSA	P15289	507 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	SP100	P23497	879 aa	Predicted RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	HOXD9	P28356	352 aa	Predicted RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	EPHB2	P29323	1055 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	TPI1	P60174	286 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	PAFAH1B3	Q15102	231 aa	Known RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	DHCR24	Q15392	516 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	LY6G5C	Q5SRR4	150 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	CXorf57	Q6NSI4	855 aa	Known RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	CHST9	Q7L1S5	443 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	CIR1	Q86X95	450 aa	Predicted RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	ARHGAP12	Q8IWW6	846 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	TP53INP2	Q8IXH6	220 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	UMODL1-AS1	Q8N2C9	162 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	PLCD3	Q8N3E9	789 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	RTL3	Q8N8U3	475 aa	Known RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	TDRD5	Q8NAT2	981 aa	Known RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	KIF18A	Q8NI77	898 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	TMA16	Q96EY4	203 aa	Known RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	RPRD1A	Q96P16	312 aa	Predicted RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	HEMGN	Q9BXL5	484 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	LRRC19	Q9H756	370 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	KCNK12	Q9HB15	430 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	SPHK2	Q9NRA0	654 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	DUS2	Q9NX74	493 aa	Known RBP	13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	SMARCAL1	Q9NZC9	954 aa		13.6	□□□□□ -0.23
APBA3-204	ENST00000589934	COL4A3	Q01955	1670 aa		13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	C19orf67	A6NJJ6	358 aa		13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	CHAD	O15335	359 aa		13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	FGF10	O15520	208 aa	Predicted RBP	13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	HOXC11	O43248	304 aa	Predicted RBP	13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	TSPAN3	O60637	253 aa		13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	CST8	O60676	142 aa		13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	ARL4A	P40617	200 aa		13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	CDH4	P55283	916 aa		13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	TNK2	Q07912	1038 aa		13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	GRM2	Q14416	872 aa		13.59	□□□□□ -0.23
APBA3-204	ENST00000589934	PDGFRL	Q15198	375 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms