RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 UBE3AQ05086 875 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 ZNF33AQ06730 810 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 GRIN2CQ14957 1233 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 NUGGCQ68CJ6 796 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 LZTR1Q8N653 840 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 NAT8LQ8N9F0 302 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 HTR3CQ8WXA8 447 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 CPT1BQ92523 772 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 PRCCQ92733 491 aaPredicted RBP12.42□□□□□ -0.42
CCBE1-203ENST00000589116 PSMG2Q969U7 264 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 SIK2Q9H0K1 926 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 DONSONQ9NYP3 566 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 TRPM5Q9NZQ8 1165 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 DNMT3LQ9UJW3 386 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 PLAAQ9Y263 795 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 ASB3Q9Y575 518 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 HS3ST4Q9Y661 456 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.42□□□□□ -0.42
CCBE1-203ENST00000589116 SLC12A8A0AV02 714 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 ZNF840PA6NDX5 716 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 WASH4PA8MWX3 477 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 CHADO15335 359 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 MTSS1O43312 755 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 MOCS2O96007 188 aaPredicted RBP12.42□□□□□ -0.42
CCBE1-203ENST00000589116 CNPP09543 421 aaKnown RBP12.42□□□□□ -0.42
CCBE1-203ENST00000589116 CHKAP35790 457 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 GGCXP38435 758 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 GALNT2Q10471 571 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 TWF1Q12792 350 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 HECTD3Q5T447 861 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 DENND2CQ68D51 928 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 CCDC149Q6ZUS6 474 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 TMC7Q7Z402 723 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 CCDC25Q86WR0 208 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 MIB1Q86YT6 1006 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 GOLGA6L1Q8N7Z2 621 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 HDAC11Q96DB2 347 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 GAS2L1Q99501 681 aaPredicted RBP12.42□□□□□ -0.42
CCBE1-203ENST00000589116 SH3GL2Q99962 352 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 EMILIN2Q9BXX0 1053 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 FRMD8Q9BZ67 464 aaPredicted RBP12.42□□□□□ -0.42
CCBE1-203ENST00000589116 KLC2Q9H0B6 622 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 PRDM12Q9H4Q4 367 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 CCSER2Q9H7U1 834 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 SNX10Q9Y5X0 201 aa12.42□□□□□ -0.42
CCBE1-203ENST00000589116 A0A0A0MRY4 1105 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 LCHNA4D1U4 455 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 E9PAM4 449 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 C5orf67F2Z3F1 127 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 EIF3HO15372 352 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCBE1-203ENST00000589116 OPHN1O60890 802 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 CXCL14O95715 111 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 TBX18O95935 607 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 VAV1P15498 845 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 MAGEA6P43360 314 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 FAM193AP78312 1265 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 BASP1P80723 227 aaKnown RBP12.41□□□□□ -0.42
CCBE1-203ENST00000589116 COG7P83436 770 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 PPIDQ08752 370 aaKnown RBP12.41□□□□□ -0.42
CCBE1-203ENST00000589116 PIK3R6Q5UE93 754 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 RWDD4Q6NW29 188 aaKnown RBP12.41□□□□□ -0.42
CCBE1-203ENST00000589116 LRRC31Q6UY01 552 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 PPP1R21Q6ZMI0 780 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 NPWQ8N729 165 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 SPATA13Q96N96 652 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 EPB41L4BQ9H329 900 aa12.41□□□□□ -0.42
CCBE1-203ENST00000589116 CDC42EP4Q9H3Q1 356 aaKnown RBP12.41□□□□□ -0.42
CCBE1-203ENST00000589116 PPARGC1AQ9UBK2 798 aaKnown RBP12.41□□□□□ -0.42
CCBE1-203ENST00000589116 DOCK4Q8N1I0 1966 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 CDH23Q9H251 3354 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 ANAPC1Q9H1A4 1944 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 IGLV3-10A0A075B6K4 115 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 LINC01553A4QN01 128 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 H3BQF6 201 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 RIPK2O43353 540 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 TGM5O43548 720 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 SYF2O95926 243 aaKnown RBP12.4□□□□□ -0.42
CCBE1-203ENST00000589116 C1RP00736 705 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 SRGAP2BP0DMP2 458 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 OAS2P29728 719 aaKnown RBP12.4□□□□□ -0.42
CCBE1-203ENST00000589116 CA8P35219 290 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 GARSP41250 739 aaKnown RBP12.4□□□□□ -0.42
CCBE1-203ENST00000589116 AP1B1Q10567 949 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 KCNJ11Q14654 390 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 HIF1AQ16665 826 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 PABPC1LQ4VXU2 614 aaKnown RBP12.4□□□□□ -0.42
CCBE1-203ENST00000589116 MS4A13Q5J8X5 152 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 ARTNQ5T4W7 220 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 LILRA6Q6PI73 481 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 ARHGEF18Q6ZSZ5 1173 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 CENPUQ71F23 418 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 B4GALNT4Q76KP1 1039 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 RTL10Q7L3V2 364 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 DNAJB7Q7Z6W7 309 aaPredicted RBP12.4□□□□□ -0.42
CCBE1-203ENST00000589116 CROCCP2Q86T23 111 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 CCNYQ8ND76 341 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 PLD4Q96BZ4 506 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 P2RY11Q96G91 374 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 TTC25Q96NG3 672 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms