RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 C4orf47A7E2U8 309 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 CDX4O14627 284 aaPredicted RBP18.65■□□□□ 0.58
HDAC5-209ENST00000588703 MBD3O95983 291 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 IGLV3-19P01714 112 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 ATP5BP06576 529 aaKnown RBP18.65■□□□□ 0.58
HDAC5-209ENST00000588703 TFE3P19532 575 aaPredicted RBP18.65■□□□□ 0.58
HDAC5-209ENST00000588703 CD6P30203 668 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 CCR1P32246 355 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 HOXD12P35452 270 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 GABRB2P47870 512 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 TPMTP51580 245 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 SNX16P57768 344 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 MYL5Q02045 173 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 OR2T3Q8NH03 318 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 PRCCQ92733 491 aaPredicted RBP18.65■□□□□ 0.58
HDAC5-209ENST00000588703 TOE1Q96GM8 510 aaKnown RBP18.65■□□□□ 0.58
HDAC5-209ENST00000588703 ZNF419Q96HQ0 510 aaPredicted RBP18.65■□□□□ 0.58
HDAC5-209ENST00000588703 MRGPRX3Q96LB0 322 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 PDCL3Q9H2J4 239 aa18.65■□□□□ 0.58
HDAC5-209ENST00000588703 FAM207AQ9NSI2 230 aaPredicted RBP18.65■□□□□ 0.58
HDAC5-209ENST00000588703 WSB2Q9NYS7 404 aaPredicted RBP18.65■□□□□ 0.58
HDAC5-209ENST00000588703 LIMA1Q9UHB6 759 aaKnown RBP18.65■□□□□ 0.58
HDAC5-209ENST00000588703 NOCTQ9UK39 431 aaKnown RBP18.65■□□□□ 0.58
HDAC5-209ENST00000588703 DOCK4Q8N1I0 1966 aa18.64■□□□□ 0.58
HDAC5-209ENST00000588703 F5H5T6 163 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 NDUFS2O75306 463 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 MMEP08473 750 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 SLC2A3P11169 496 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 ZNF18P17022 549 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 NOS2P35228 1153 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 DPP6P42658 865 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 MATKP42679 507 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 COPB1P53618 953 aaKnown RBP18.64■□□□□ 0.57
HDAC5-209ENST00000588703 JAM2P57087 298 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 POLR2FP61218 127 aaKnown RBP18.64■□□□□ 0.57
HDAC5-209ENST00000588703 NOMO3P69849 1222 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 NCAPHQ15003 741 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 C2CD6Q53TS8 623 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 PITRM1Q5JRX3 1037 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 SLC23A3Q6PIS1 610 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 APTXQ7Z2E3 356 aaKnown RBP18.64■□□□□ 0.57
HDAC5-209ENST00000588703 CIR1Q86X95 450 aaPredicted RBP18.64■□□□□ 0.57
HDAC5-209ENST00000588703 XYLT1Q86Y38 959 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 ZDHHC17Q8IUH5 632 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 SLC20A1Q8WUM9 679 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 NPY6RQ99463 290 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 MTG2Q9H4K7 406 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 PRSS16Q9NQE7 514 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 PIGVQ9NUD9 493 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 TMEM63CQ9P1W3 806 aa18.64■□□□□ 0.57
HDAC5-209ENST00000588703 ACACBO00763 2458 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 LGALS16A8MUM7 142 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 M0QYT0 321 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 GFPT2O94808 682 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 LSM8O95777 96 aaKnown RBP18.63■□□□□ 0.57
HDAC5-209ENST00000588703 TPM2P07951 284 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 ABCB4P21439 1286 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 SCNN1AP37088 669 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 GGCXP38435 758 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 CTSOP43234 321 aaPredicted RBP18.63■□□□□ 0.57
HDAC5-209ENST00000588703 IRAK1P51617 712 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 CENPCQ03188 943 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 NME3Q13232 169 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 FKBP15Q5T1M5 1219 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 ERICH1Q86X53 443 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 RNF34Q969K3 372 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 NT5C3BQ969T7 300 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 C18orf8Q96DM3 657 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 CAPN10Q9HC96 672 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 NLRC4Q9NPP4 1024 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 TMEM9BQ9NQ34 198 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 FSCN3Q9NQT6 498 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 ANLNQ9NQW6 1124 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.63■□□□□ 0.57
HDAC5-209ENST00000588703 SLC12A6Q9UHW9 1150 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 CEP295Q9C0D2 2601 aa18.63■□□□□ 0.57
HDAC5-209ENST00000588703 KNL1Q8NG31 2342 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 H0Y626 953 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 I6L893 689 aaPredicted RBP18.62■□□□□ 0.57
HDAC5-209ENST00000588703 ASLP04424 464 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 CFIP05156 583 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 CHRNB2P17787 502 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 ENGP17813 658 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 RNASE9P60153 205 aaKnown RBP18.62■□□□□ 0.57
HDAC5-209ENST00000588703 TYRO3Q06418 890 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 AUHQ13825 339 aaKnown RBP18.62■□□□□ 0.57
HDAC5-209ENST00000588703 SYCP1Q15431 976 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 DUOXA1Q1HG43 343 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 PLEKHG6Q3KR16 790 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 FAM102AQ5T9C2 384 aaPredicted RBP18.62■□□□□ 0.57
HDAC5-209ENST00000588703 NAA35Q5VZE5 725 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 TRNP1Q6NT89 227 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 FBXL22Q6P050 247 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 APCDD1Q8J025 514 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 CCAR2Q8N163 923 aaKnown RBP18.62■□□□□ 0.57
HDAC5-209ENST00000588703 CPA5Q8WXQ8 436 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 IGSF8Q969P0 613 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 GPR174Q9BXC1 333 aa18.62■□□□□ 0.57
HDAC5-209ENST00000588703 NUSAP1Q9BXS6 441 aaKnown RBP18.62■□□□□ 0.57
HDAC5-209ENST00000588703 KIAA1522Q9P206 1035 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms