RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PYROXD1Q8WU10 500 aa15.1■□□□□ 0.01
CCDC43-203ENST00000588210 MZB1Q8WU39 189 aa15.1■□□□□ 0.01
CCDC43-203ENST00000588210 NSMCE1Q8WV22 266 aa15.1■□□□□ 0.01
CCDC43-203ENST00000588210 KBTBD7Q8WVZ9 684 aa15.1■□□□□ 0.01
CCDC43-203ENST00000588210 UTP4Q969X6 686 aaKnown RBP15.1■□□□□ 0.01
CCDC43-203ENST00000588210 RSRC1Q96IZ7 334 aaKnown RBP15.1■□□□□ 0.01
CCDC43-203ENST00000588210 TMEM237Q96Q45 408 aa15.1■□□□□ 0.01
CCDC43-203ENST00000588210 WDR83Q9BRX9 315 aaKnown RBP15.1■□□□□ 0.01
CCDC43-203ENST00000588210 PLXNA3P51805 1871 aa15.1■□□□□ 0.01
CCDC43-203ENST00000588210 GOLGA8SH3BPF8 625 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 H3BQ06 376 aaPredicted RBP15.09■□□□□ 0.01
CCDC43-203ENST00000588210 GOLGA8MH3BSY2 632 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 MED7O43513 233 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 CST8O60676 142 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 SPATA31D3P0C874 917 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 KRT3P12035 628 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 PCSK1P29120 753 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 GBP2P32456 591 aaPredicted RBP15.09■□□□□ 0.01
CCDC43-203ENST00000588210 RPL22P35268 128 aaKnown RBP15.09■□□□□ 0.01
CCDC43-203ENST00000588210 DYNLT1P63172 113 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 SMARCB1Q12824 385 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 FNBP1LQ5T0N5 605 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 SPATA31D4Q6ZUB0 917 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 PAFAH2Q99487 392 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 ZCWPW1Q9H0M4 648 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 ZWILCHQ9H900 591 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 SFXN1Q9H9B4 322 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 WDR35Q9P2L0 1181 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 AFF4Q9UHB7 1163 aaKnown RBP15.09■□□□□ 0.01
CCDC43-203ENST00000588210 CD207Q9UJ71 328 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 POLIQ9UNA4 740 aa15.09■□□□□ 0.01
CCDC43-203ENST00000588210 MTCL1Q9Y4B5 1905 aaKnown RBP15.09■□□□□ 0.01
CCDC43-203ENST00000588210 TM9SF1O15321 606 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 OR4Q2P0C623 313 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 KRT4P19013 534 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 SSTR1P30872 391 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 TSPY1Q01534 308 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 GAD2Q05329 585 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 EFTUD2Q15029 972 aaKnown RBP eCLIP15.08■□□□□ 0.012e-8■■■■□ 22.7
CCDC43-203ENST00000588210 SMTNL2Q2TAL5 461 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 MSS51Q4VC12 460 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 SYCE2Q6PIF2 218 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 OTOAQ7RTW8 1153 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 OSTM1Q86WC4 334 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 DCP1BQ8IZD4 617 aaKnown RBP15.08■□□□□ 0.01
CCDC43-203ENST00000588210 RSAD2Q8WXG1 361 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 ZNF75CPQ92670 426 aaPredicted RBP15.08■□□□□ 0.01
CCDC43-203ENST00000588210 ALKBH8Q96BT7 664 aaKnown RBP15.08■□□□□ 0.01
CCDC43-203ENST00000588210 MRPL45Q9BRJ2 306 aaKnown RBP15.08■□□□□ 0.01
CCDC43-203ENST00000588210 SNX25Q9H3E2 840 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 CYTH4Q9UIA0 394 aa15.08■□□□□ 0.01
CCDC43-203ENST00000588210 TMEM63AO94886 807 aa15.08■□□□□ 0
CCDC43-203ENST00000588210 GNL1P36915 607 aaPredicted RBP15.08■□□□□ 0
CCDC43-203ENST00000588210 SLC8A3P57103 927 aa15.08■□□□□ 0
CCDC43-203ENST00000588210 PSMC1P62191 440 aaKnown RBP15.08■□□□□ 0
CCDC43-203ENST00000588210 PUS10Q3MIT2 529 aaKnown RBP15.08■□□□□ 0
CCDC43-203ENST00000588210 RNF19BQ6ZMZ0 732 aa15.08■□□□□ 0
CCDC43-203ENST00000588210 CCDC149Q6ZUS6 474 aa15.08■□□□□ 0
CCDC43-203ENST00000588210 SMRP1Q8NCR6 262 aa15.08■□□□□ 0
CCDC43-203ENST00000588210 CMASQ8NFW8 434 aaPredicted RBP15.08■□□□□ 0
CCDC43-203ENST00000588210 OR6B3Q8NGW1 331 aa15.08■□□□□ 0
CCDC43-203ENST00000588210 MRRFQ96E11 262 aaKnown RBP15.08■□□□□ 0
CCDC43-203ENST00000588210 THOC1Q96FV9 657 aaKnown RBP15.08■□□□□ 0
CCDC43-203ENST00000588210 TMEM209Q96SK2 561 aa15.08■□□□□ 0
CCDC43-203ENST00000588210 ZDHHC7Q9NXF8 308 aa15.08■□□□□ 0
CCDC43-203ENST00000588210 SAE1Q9UBE0 346 aaPredicted RBP15.08■□□□□ 0
CCDC43-203ENST00000588210 APOC4-APOC2K7ER74 178 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 APOC2P02655 101 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 TARSP26639 723 aaKnown RBP15.07■□□□□ 0
CCDC43-203ENST00000588210 CCNG1P51959 295 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 CLNS1AP54105 237 aaKnown RBP15.07■□□□□ 0
CCDC43-203ENST00000588210 MRPS5P82675 430 aaKnown RBP15.07■□□□□ 0
CCDC43-203ENST00000588210 TFF2Q03403 129 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 SLC39A12Q504Y0 691 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 SLC45A4Q5BKX6 768 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 INTS6LQ5JSJ4 861 aaKnown RBP15.07■□□□□ 0
CCDC43-203ENST00000588210 FYB2Q5VWT5 728 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 XYLT1Q86Y38 959 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 TCEAL8Q8IYN2 117 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 MAB21L3Q8N8X9 362 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 FBXO36Q8NEA4 188 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 C2orf15Q8WU43 125 aaKnown RBP15.07■□□□□ 0
CCDC43-203ENST00000588210 DCAKDQ8WVC6 231 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 BCO2Q9BYV7 579 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 S1PR5Q9H228 398 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 SMYD3Q9H7B4 428 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 CYP3A43Q9HB55 503 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 TJP2Q9UDY2 1190 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 CDH9Q9ULB4 789 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 TRAFD1O14545 582 aaPredicted RBP15.07■□□□□ 0
CCDC43-203ENST00000588210 PAPLNO95428 1278 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 C8AP07357 584 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 CD19P15391 556 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 ADRA1DP25100 572 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 LMO2P25791 158 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 CDH8P55286 799 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 ACAP1Q15027 740 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 NFE2Q16621 373 aaPredicted RBP15.07■□□□□ 0
CCDC43-203ENST00000588210 KCNT1Q5JUK3 1230 aa15.07■□□□□ 0
CCDC43-203ENST00000588210 CES5AQ6NT32 575 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms