RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 YWHAZP63104 245 aaKnown RBP14.85□□□□□ -0.03
VMP1-206ENST00000587945 MEA1Q16626 185 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 PITRM1Q5JRX3 1037 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 BEND5Q7L4P6 421 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 CIR1Q86X95 450 aaPredicted RBP14.85□□□□□ -0.03
VMP1-206ENST00000587945 DHX40Q8IX18 779 aaKnown RBP14.85□□□□□ -0.03
VMP1-206ENST00000587945 ZNF557Q8N988 423 aaPredicted RBP14.85□□□□□ -0.03
VMP1-206ENST00000587945 C1orf216Q8TAB5 229 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 CPXM1Q96SM3 734 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 TMEM121BQ9BXQ6 578 aaPredicted RBP14.85□□□□□ -0.03
VMP1-206ENST00000587945 ZDHHC5Q9C0B5 715 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 COX16Q9P0S2 106 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 KLK13Q9UKR3 277 aa14.85□□□□□ -0.03
VMP1-206ENST00000587945 PCDH15Q96QU1 1955 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 KMT2BQ9UMN6 2715 aaPredicted RBP14.84□□□□□ -0.03
VMP1-206ENST00000587945 FRYQ5TBA9 3013 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 A0A1B0GVT2 93 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 TTC34A8MYJ7 566 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 H0Y626 953 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 GRAP2O75791 330 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 FSBPO95073 299 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 SEMA4FO95754 770 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 PNMA6AP0CW24 399 aaPredicted RBP14.84□□□□□ -0.03
VMP1-206ENST00000587945 C7P10643 843 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 CSNK1EP49674 416 aaKnown RBP14.84□□□□□ -0.03
VMP1-206ENST00000587945 ST8SIA6P61647 398 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 SLC14A1Q13336 389 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 ZNF776Q68DI1 518 aaPredicted RBP14.84□□□□□ -0.03
VMP1-206ENST00000587945 LAYNQ6UX15 382 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 NAXDQ8IW45 347 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 CCDC117Q8IWD4 279 aaPredicted RBP14.84□□□□□ -0.03
VMP1-206ENST00000587945 APCDD1Q8J025 514 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 DEFB106AQ8N104 65 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 CHCHD4Q8N4Q1 142 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 GANCQ8TET4 914 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 SHC3Q92529 594 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 PPP1R13BQ96KQ4 1090 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 TRIM62Q9BVG3 475 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 BTBD1Q9H0C5 482 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 GAREM1Q9H706 876 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 FAM204AQ9H8W3 233 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 FBRSQ9HAH7 460 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 SIX2Q9NPC8 291 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 ERVW-1Q9UQF0 538 aa14.84□□□□□ -0.03
VMP1-206ENST00000587945 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.84□□□□□ -0.03
VMP1-206ENST00000587945 ASLP04424 464 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 CDK17Q00537 523 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 ZBTB16Q05516 673 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 EIF4EBP2Q13542 120 aaPredicted RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 TRIP6Q15654 476 aaKnown RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 TPD52L1Q16890 204 aaPredicted RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 HLA-BQ31612 363 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 HNRNPA1L2Q32P51 320 aaKnown RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 TTC31Q49AM3 519 aaPredicted RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 HSP90AA4PQ58FG1 418 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 C9orf64Q5T6V5 341 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 FAM183BPQ6ZVS7 135 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 MLKLQ8NB16 471 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 C1orf131Q8NDD1 294 aaKnown RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 GATA6Q92908 595 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 BIRC7Q96CA5 298 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 BTN2A3PQ96KV6 586 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 RPL10LQ96L21 214 aaKnown RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 FAM81BQ96LP2 452 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 PRMT1Q99873 361 aaKnown RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 PCED1AQ9H1Q7 454 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 RSPH9Q9H1X1 276 aaPredicted RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 PABPC3Q9H361 631 aaKnown RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 TM9SF3Q9HD45 589 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 PLCB1Q9NQ66 1216 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 DDIT4Q9NX09 232 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 KIAA1522Q9P206 1035 aaPredicted RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 SERGEFQ9UGK8 458 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 SLCO3A1Q9UIG8 710 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 DNAJC12Q9UKB3 198 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 FNDC3AQ9Y2H6 1198 aaKnown RBP14.83□□□□□ -0.04
VMP1-206ENST00000587945 CEP83Q9Y592 693 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 PCDHB9Q9Y5E1 797 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 USP24Q9UPU5 2620 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 PI4KAP42356 2102 aa14.83□□□□□ -0.04
VMP1-206ENST00000587945 FAM170AA1A519 330 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 GTPBP10A4D1E9 387 aaKnown RBP14.82□□□□□ -0.04
VMP1-206ENST00000587945 FAM47DPA6NHR8 397 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 KCNU1A8MYU2 1149 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 F5H5T6 163 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 FOXN3O00409 490 aaPredicted RBP14.82□□□□□ -0.04
VMP1-206ENST00000587945 MID1O15344 667 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 ERBB2P04626 1255 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 MATKP42679 507 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 STK19P49842 368 aaPredicted RBP14.82□□□□□ -0.04
VMP1-206ENST00000587945 ECT2LQ008S8 904 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 KIF19Q2TAC6 998 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 OR6B2Q6IFH4 312 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 SLC47A2Q86VL8 602 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 MMAAQ8IVH4 418 aaKnown RBP14.82□□□□□ -0.04
VMP1-206ENST00000587945 PNPLA1Q8N8W4 532 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 ATP6V0D2Q8N8Y2 350 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 SETD7Q8WTS6 366 aaKnown RBP14.82□□□□□ -0.04
VMP1-206ENST00000587945 RNF34Q969K3 372 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 SLC2A13Q96QE2 648 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms