RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 MTG2Q9H4K7 406 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 RMND1Q9NWS8 449 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 FBXL12Q9NXK8 326 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 ARMCX3Q9UH62 379 aaPredicted RBP14.6□□□□□ -0.07
DNMT1-213ENST00000587604 ATP6V1DQ9Y5K8 247 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 ARID1BQ8NFD5 2236 aaPredicted RBP14.6□□□□□ -0.07
DNMT1-213ENST00000587604 PLXNA2O75051 1894 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 A0A1W2PPC4 97 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 RNASEH1O60930 286 aaKnown RBP14.59□□□□□ -0.07
DNMT1-213ENST00000587604 LTFP02788 710 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 ASLP04424 464 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 CSKP41240 450 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 RGS7P49802 495 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 CYP4F3Q08477 520 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 PNOCQ13519 176 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 ARID5BQ14865 1188 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 HNRNPA1L2Q32P51 320 aaKnown RBP14.59□□□□□ -0.07
DNMT1-213ENST00000587604 INAVAQ3KP66 663 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 ZNF658Q5TYW1 1059 aaPredicted RBP14.59□□□□□ -0.07
DNMT1-213ENST00000587604 NADSYN1Q6IA69 706 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 TMEM270Q6UE05 265 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 MARCH9Q86YJ5 346 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 PDCD7Q8N8D1 485 aaKnown RBP14.59□□□□□ -0.07
DNMT1-213ENST00000587604 KDM1BQ8NB78 822 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 HJURPQ8NCD3 748 aaPredicted RBP14.59□□□□□ -0.07
DNMT1-213ENST00000587604 SKA1Q96BD8 255 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 ACE2Q9BYF1 805 aaPredicted RBP14.59□□□□□ -0.07
DNMT1-213ENST00000587604 STIM2Q9P246 746 aa14.59□□□□□ -0.07
DNMT1-213ENST00000587604 INTS6Q9UL03 887 aaKnown RBP14.59□□□□□ -0.07
DNMT1-213ENST00000587604 A0A1B0GTQ1 180 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 TYW5A2RUC4 315 aaKnown RBP14.58□□□□□ -0.08
DNMT1-213ENST00000587604 FAM47DPA6NHR8 397 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 RNF225M0QZC1 329 aaPredicted RBP14.58□□□□□ -0.08
DNMT1-213ENST00000587604 PIK3R2O00459 728 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 SIN3BO75182 1162 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 FBXO21O94952 628 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 PMS1P54277 932 aaKnown RBP14.58□□□□□ -0.08
DNMT1-213ENST00000587604 GALCP54803 685 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 C21orf59P57076 290 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 LRRC63Q05C16 580 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 STILQ15468 1287 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 MRGPRX3Q96LB0 322 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 GSDMAQ96QA5 445 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 ZSWIM1Q9BR11 485 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 NEUROG2Q9H2A3 272 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 METTL14Q9HCE5 456 aaKnown RBP14.58□□□□□ -0.08
DNMT1-213ENST00000587604 FTSJ1Q9UET6 329 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 PCDHB4Q9Y5E5 795 aa14.58□□□□□ -0.08
DNMT1-213ENST00000587604 COL5A1P20908 1838 aaPredicted RBP14.57□□□□□ -0.08
DNMT1-213ENST00000587604 TARSL2A2RTX5 802 aaKnown RBP14.57□□□□□ -0.08
DNMT1-213ENST00000587604 FAM149AA5PLN7 773 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 LRRC72A6NJI9 287 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 E9PAM4 449 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 M0QYV0 167 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 PMM2O15305 246 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 FYNP06241 537 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 SRPRAP08240 638 aaKnown RBP14.57□□□□□ -0.08
DNMT1-213ENST00000587604 FMO5P49326 533 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 RPS24P62847 133 aaKnown RBP14.57□□□□□ -0.08
DNMT1-213ENST00000587604 IL9RQ01113 521 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 CST6Q15828 149 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 C9orf64Q5T6V5 341 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 NCEH1Q6PIU2 408 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 TMPRSS12Q86WS5 348 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 CCDC117Q8IWD4 279 aaPredicted RBP14.57□□□□□ -0.08
DNMT1-213ENST00000587604 DHX40Q8IX18 779 aaKnown RBP14.57□□□□□ -0.08
DNMT1-213ENST00000587604 CARNMT1Q8N4J0 409 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 OR2T34Q8NGX1 318 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 CLEC4CQ8WTT0 213 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 MYEOVQ96EZ4 313 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 LRIG1Q96JA1 1093 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 FCRL2Q96LA5 508 aaPredicted RBP14.57□□□□□ -0.08
DNMT1-213ENST00000587604 PRICKLE1Q96MT3 831 aaPredicted RBP14.57□□□□□ -0.08
DNMT1-213ENST00000587604 SLC6A18Q96N87 628 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 SERPINB11Q96P15 392 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 NT5C1BQ96P26 610 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 ELF4Q99607 663 aaPredicted RBP14.57□□□□□ -0.08
DNMT1-213ENST00000587604 SERGEFQ9UGK8 458 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 ADAMTS1Q9UHI8 967 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 FZD4Q9ULV1 537 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 ERVW-1Q9UQF0 538 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 TLR6Q9Y2C9 796 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 PCDHGA1Q9Y5H4 931 aa14.57□□□□□ -0.08
DNMT1-213ENST00000587604 A0A087WV48 116 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 A0A1W2PP55 124 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 C10orf142B7Z368 130 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 MID1O15344 667 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 BRD2P25440 801 aaKnown RBP14.56□□□□□ -0.08
DNMT1-213ENST00000587604 SLC8A1P32418 973 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 NNTQ13423 1086 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 CDH18Q13634 790 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 CCDC157Q569K6 752 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 FSCBQ5H9T9 825 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 MS4A13Q5J8X5 152 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 PITRM1Q5JRX3 1037 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 DHRS13Q6UX07 377 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 MMAAQ8IVH4 418 aaKnown RBP14.56□□□□□ -0.08
DNMT1-213ENST00000587604 SCUBE3Q8IX30 993 aa14.56□□□□□ -0.08
DNMT1-213ENST00000587604 FMR1NBQ8N0W7 255 aaPredicted RBP14.56□□□□□ -0.08
DNMT1-213ENST00000587604 CFAP52Q8N1V2 620 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms