RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 FSTL4Q6MZW2 842 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 C14orf80Q86SX3 495 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 MFN1Q8IWA4 741 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 CFAP52Q8N1V2 620 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 SYNPOQ8N3V7 929 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 FBXL6Q8N531 539 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 TERB1Q8NA31 727 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 FIBINQ8TAL6 211 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 TEKT4Q8WW24 435 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 IGSF8Q969P0 613 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 PEBP4Q96S96 227 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 EPAS1Q99814 870 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 SNRNP25Q9BV90 132 aaKnown RBP19.77■□□□□ 0.76
DDX39A-204ENST00000586558 FOXQ1Q9C009 403 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 STIM2Q9P246 746 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 SIT1Q9Y3P8 196 aa19.77■□□□□ 0.76
DDX39A-204ENST00000586558 LUC7L3O95232 432 aaKnown RBP19.76■□□□□ 0.75
DDX39A-204ENST00000586558 CISD3P0C7P0 127 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 AOC1P19801 751 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 SLC1A1P43005 524 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 MAGEA9P43362 315 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 CDH4P55283 916 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 OXCT1P55809 520 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 SLC25A11Q02978 314 aaKnown RBP19.76■□□□□ 0.75
DDX39A-204ENST00000586558 KDSRQ06136 332 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 CCDC173Q0VFZ6 552 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 CWF19L1Q69YN2 538 aaKnown RBP19.76■□□□□ 0.75
DDX39A-204ENST00000586558 ASTLQ6HA08 431 aaPredicted RBP19.76■□□□□ 0.75
DDX39A-204ENST00000586558 CYP4V2Q6ZWL3 525 aaPredicted RBP19.76■□□□□ 0.75
DDX39A-204ENST00000586558 CCDC105Q8IYK2 499 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 CCAR2Q8N163 923 aaKnown RBP19.76■□□□□ 0.75
DDX39A-204ENST00000586558 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.76■□□□□ 0.754e-10■■■■□ 21.2
DDX39A-204ENST00000586558 CLDN23Q96B33 292 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 ZYG11BQ9C0D3 744 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 LACRTQ9GZZ8 138 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 FBRSL1Q9HCM7 1045 aaKnown RBP19.76■□□□□ 0.75
DDX39A-204ENST00000586558 SNX10Q9Y5X0 201 aa19.76■□□□□ 0.75
DDX39A-204ENST00000586558 PRR33A8MZF0 331 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 H0Y626 953 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 SRGAP2O75044 1071 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 LRIG2O94898 1065 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 CCDC175P0C221 793 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 CHRNB1P11230 501 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 IL1R2P27930 398 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 TNFRSF4P43489 277 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 RPS9P46781 194 aaKnown RBP19.75■□□□□ 0.75
DDX39A-204ENST00000586558 SEMA3BQ13214 749 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 IFI16Q16666 785 aaKnown RBP19.75■□□□□ 0.75
DDX39A-204ENST00000586558 C11orf63Q6NUN7 778 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 ANKS1BQ7Z6G8 1248 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 CARNMT1Q8N4J0 409 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 WFIKKN2Q8TEU8 576 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 TBC1D31Q96DN5 1066 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 TSGA10Q9BZW7 698 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 DHX35Q9H5Z1 703 aaKnown RBP19.75■□□□□ 0.75
DDX39A-204ENST00000586558 C11orf16Q9NQ32 467 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 TFR2Q9UP52 801 aa19.75■□□□□ 0.75
DDX39A-204ENST00000586558 MTF2Q9Y483 593 aaPredicted RBP19.75■□□□□ 0.75
DDX39A-204ENST00000586558 KIAA1549LQ6ZVL6 1849 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.74■□□□□ 0.75
DDX39A-204ENST00000586558 TBC1D3BA6NDS4 549 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 TMEM110-MUSTN1A8MSY1 372 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 FAM72CH0Y354 149 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 BUB1BO60566 1050 aaPredicted RBP19.74■□□□□ 0.75
DDX39A-204ENST00000586558 KRT7P08729 469 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 RHOQP17081 205 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 HOXC13P31276 330 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 SSR1P43307 286 aaKnown RBP19.74■□□□□ 0.75
DDX39A-204ENST00000586558 MESP2Q0VG99 397 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 ZNF177Q13360 481 aaPredicted RBP19.74■□□□□ 0.75
DDX39A-204ENST00000586558 SLC12A1Q13621 1099 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 EIF4HQ15056 248 aaKnown RBP19.74■□□□□ 0.75
DDX39A-204ENST00000586558 E2F5Q15329 346 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 TMEM31Q5JXX7 168 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 ARTNQ5T4W7 220 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 FAM72AQ5TYM5 149 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 DAB2IPQ5VWQ8 1189 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 FAM72DQ6L9T8 149 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 POLNQ7Z5Q5 900 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 FAM72BQ86X60 149 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 CIR1Q86X95 450 aaPredicted RBP19.74■□□□□ 0.75
DDX39A-204ENST00000586558 IER2Q9BTL4 223 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 ZWILCHQ9H900 591 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 ABCB8Q9NUT2 735 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 GGA2Q9UJY4 613 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 CLEC4EQ9ULY5 219 aa19.74■□□□□ 0.75
DDX39A-204ENST00000586558 TRIM24O15164 1050 aa19.73■□□□□ 0.75
DDX39A-204ENST00000586558 FGF10O15520 208 aaPredicted RBP19.73■□□□□ 0.75
DDX39A-204ENST00000586558 EGFP01133 1207 aa19.73■□□□□ 0.75
DDX39A-204ENST00000586558 TCF4P15884 667 aa19.73■□□□□ 0.75
DDX39A-204ENST00000586558 HLA-FP30511 346 aa19.73■□□□□ 0.75
DDX39A-204ENST00000586558 IRAK1P51617 712 aa19.73■□□□□ 0.75
DDX39A-204ENST00000586558 FZD5Q13467 585 aa19.73■□□□□ 0.75
DDX39A-204ENST00000586558 DMC1Q14565 340 aa19.73■□□□□ 0.75
DDX39A-204ENST00000586558 DPYSL2Q16555 572 aa19.73■□□□□ 0.75
DDX39A-204ENST00000586558 LRRC38Q5VT99 294 aa19.73■□□□□ 0.75
DDX39A-204ENST00000586558 RWDD4Q6NW29 188 aaKnown RBP19.73■□□□□ 0.75
DDX39A-204ENST00000586558 KIAA0907Q7Z7F0 614 aaPredicted RBP19.73■□□□□ 0.75
DDX39A-204ENST00000586558 PYROXD2Q8N2H3 581 aa19.73■□□□□ 0.75
DDX39A-204ENST00000586558 TPCN2Q8NHX9 752 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms