RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 SLC14A1Q13336 389 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 HNRNPDQ14103 355 aaKnown RBP17.56■□□□□ 0.4
TRIM47-203ENST00000586495 TTC31Q49AM3 519 aaPredicted RBP17.56■□□□□ 0.4
TRIM47-203ENST00000586495 VWA3BQ502W6 1294 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 RAP1GAP2Q684P5 730 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 ZNF776Q68DI1 518 aaPredicted RBP17.56■□□□□ 0.4
TRIM47-203ENST00000586495 OR6B2Q6IFH4 312 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 C11orf57Q6ZUT1 292 aaPredicted RBP17.56■□□□□ 0.4
TRIM47-203ENST00000586495 PIP4P1Q86T03 277 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 PASD1Q8IV76 773 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 DEFB106AQ8N104 65 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 CFAP52Q8N1V2 620 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 RNF34Q969K3 372 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 MYEOVQ96EZ4 313 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 SLC2A13Q96QE2 648 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 BTBD1Q9H0C5 482 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 FAM204AQ9H8W3 233 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 SIX2Q9NPC8 291 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 XPO7Q9UIA9 1087 aaKnown RBP17.56■□□□□ 0.4
TRIM47-203ENST00000586495 SCML1Q9UN30 329 aa17.56■□□□□ 0.4
TRIM47-203ENST00000586495 ADAMTS9Q9P2N4 1935 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 KCNU1A8MYU2 1149 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 FOXN3O00409 490 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 BCAT2O15382 392 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 RNASEH1O60930 286 aaKnown RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 SRPRAP08240 638 aaKnown RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 CCR1P32246 355 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 RPS14P62263 151 aaKnown RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 SFSWAPQ12872 951 aaKnown RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 FOXC1Q12948 553 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 EIF4EBP2Q13542 120 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 SLC12A1Q13621 1099 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 TAF5Q15542 800 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 DPCR1Q3MIW9 517 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 CT47A1Q5JQC4 288 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 PITRM1Q5JRX3 1037 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 ZCCHC9Q8N567 271 aaKnown RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 PDCL3Q9H2J4 239 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 SYNCQ9H7C4 482 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 DDIT4Q9NX09 232 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 EIF2B4Q9UI10 523 aaKnown RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 INTS6Q9UL03 887 aaKnown RBP17.55■□□□□ 0.4
TRIM47-203ENST00000586495 NCKAP1Q9Y2A7 1128 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 PCDH15Q96QU1 1955 aa17.55■□□□□ 0.4
TRIM47-203ENST00000586495 PCNX2A6NKB5 2137 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 ACACBO00763 2458 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 SYNJ2BP-COX16A0A087WUM0 186 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 PES1O00541 588 aaKnown RBP17.54■□□□□ 0.4
TRIM47-203ENST00000586495 ACSL1P33121 698 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 RDXP35241 583 aaKnown RBP17.54■□□□□ 0.4
TRIM47-203ENST00000586495 CLCN1P35523 988 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 NNMTP40261 264 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 OXCT1P55809 520 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 PITX1P78337 314 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-203ENST00000586495 GRIK2Q13002 908 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 ARID5BQ14865 1188 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 ST3GAL2Q16842 350 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 HNRNPA1L2Q32P51 320 aaKnown RBP17.54■□□□□ 0.4
TRIM47-203ENST00000586495 FSCBQ5H9T9 825 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 RABGAP1LQ5R372 815 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 TTC39BQ5VTQ0 682 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-203ENST00000586495 RNF219Q5W0B1 726 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-203ENST00000586495 FAM183BPQ6ZVS7 135 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 SLC47A2Q86VL8 602 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 C1orf131Q8NDD1 294 aaKnown RBP17.54■□□□□ 0.4
TRIM47-203ENST00000586495 OR2I1PQ8NGU4 316 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 SNX19Q92543 992 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 MYO19Q96H55 970 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 RSPH9Q9H1X1 276 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-203ENST00000586495 SGK2Q9HBY8 427 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 COX16Q9P0S2 106 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 ERVW-1Q9UQF0 538 aa17.54■□□□□ 0.4
TRIM47-203ENST00000586495 MUC22E2RYF6 1773 aaPredicted RBP17.53■□□□□ 0.4
TRIM47-203ENST00000586495 TARSL2A2RTX5 802 aaKnown RBP17.53■□□□□ 0.4
TRIM47-203ENST00000586495 GRAP2O75791 330 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 SEMA4FO95754 770 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 NOS2P35228 1153 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 ECT2LQ008S8 904 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 SLC6A3Q01959 620 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 RAPGEF1Q13905 1077 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 MIIPQ5JXC2 388 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 IL27RAQ6UWB1 636 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 OLFML1Q6UWY5 402 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 MMS22LQ6ZRQ5 1243 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 USP30Q70CQ3 517 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 SLC26A9Q7LBE3 791 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 ZDHHC17Q8IUH5 632 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 FAM71AQ8IYT1 594 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 TMEM35BQ8NCS4 154 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 GANCQ8TET4 914 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 MRGPRX3Q96LB0 322 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 PPP1R9BQ96SB3 815 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 RRN3Q9NYV6 651 aa17.53■□□□□ 0.4
TRIM47-203ENST00000586495 AJAP1Q9UKB5 411 aaPredicted RBP17.53■□□□□ 0.4
TRIM47-203ENST00000586495 CACNA1EQ15878 2313 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 EDDM13A0A1B0GTR0 161 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 A0A1B0GVM2 712 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 TCAF2A6NFQ2 919 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 SIN3BO75182 1162 aa17.52■□□□□ 0.4
TRIM47-203ENST00000586495 DAB1O75553 588 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms