RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 IRF1P10914 325 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 HOXA6P31267 233 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 SLC11A2P49281 568 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 CXCR3P49682 368 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 FOXK2Q01167 660 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 SRSF5Q13243 272 aaKnown RBP16.67■□□□□ 0.26
ATG4D-205ENST00000586477 BNIPLQ7Z465 357 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 PSTKQ8IV42 348 aaKnown RBP16.67■□□□□ 0.26
ATG4D-205ENST00000586477 PHTF2Q8N3S3 785 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 ATP6V0D2Q8N8Y2 350 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 TPCN2Q8NHX9 752 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 AZIN2Q96A70 460 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 DDX50Q9BQ39 737 aaKnown RBP16.67■□□□□ 0.26
ATG4D-205ENST00000586477 PYCARDQ9ULZ3 195 aa16.67■□□□□ 0.26
ATG4D-205ENST00000586477 SLC9A3R1O14745 358 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-205ENST00000586477 HRO43593 1189 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 BUB1O43683 1085 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 BUB1BO60566 1050 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-205ENST00000586477 IGLV3-27P01718 113 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 KRT7P08729 469 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 AMPD2Q01433 879 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 OGDHQ02218 1023 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 NR1H3Q13133 447 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 C15orf59Q2T9L4 293 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-205ENST00000586477 BOLA3Q53S33 107 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 LY6G5CQ5SRR4 150 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 TRNP1Q6NT89 227 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 ADAM32Q8TC27 787 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 NTAN1Q96AB6 310 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 OTUB2Q96DC9 234 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 BTN2A3PQ96KV6 586 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 IRX2Q9BZI1 471 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-205ENST00000586477 TBC1D14Q9P2M4 693 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 NCDNQ9UBB6 729 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 TFR2Q9UP52 801 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 SMG5Q9UPR3 1016 aaKnown RBP16.66■□□□□ 0.26
ATG4D-205ENST00000586477 DUSP10Q9Y6W6 482 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 CACNA1AO00555 2505 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 DNAH14Q0VDD8 3507 aa16.66■□□□□ 0.26
ATG4D-205ENST00000586477 SDK1Q7Z5N4 2213 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 SYNJ2BP-COX16A0A087WUM0 186 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 LRCH4O75427 683 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 SSR1P43307 286 aaKnown RBP16.65■□□□□ 0.26
ATG4D-205ENST00000586477 ZNF135P52742 658 aaPredicted RBP16.65■□□□□ 0.26
ATG4D-205ENST00000586477 NRLP54845 237 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 HDAC4P56524 1084 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 ZNF252P-AS1Q0IIN9 211 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 EIF4EBP2Q13542 120 aaPredicted RBP16.65■□□□□ 0.26
ATG4D-205ENST00000586477 ODF2Q5BJF6 829 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 EFHC2Q5JST6 749 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 LRRC38Q5VT99 294 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 HEATR6Q6AI08 1181 aaKnown RBP16.65■□□□□ 0.26
ATG4D-205ENST00000586477 SCYL2Q6P3W7 929 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 HTR3DQ70Z44 454 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 POLNQ7Z5Q5 900 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 TMEM25Q86YD3 366 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 REXO1L1PQ8IX06 675 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 ETFBKMTQ8IXQ9 262 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 RPLP0P6Q8NHW5 317 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 SLC39A13Q96H72 371 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 PIGVQ9NUD9 493 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 TRMT1Q9NXH9 659 aaKnown RBP16.65■□□□□ 0.26
ATG4D-205ENST00000586477 COX16Q9P0S2 106 aa16.65■□□□□ 0.26
ATG4D-205ENST00000586477 TMEM110-MUSTN1A8MSY1 372 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 MIF4GDA9UHW6 222 aaKnown RBP16.64■□□□□ 0.25
ATG4D-205ENST00000586477 MSI1O43347 362 aaKnown RBP16.64■□□□□ 0.25
ATG4D-205ENST00000586477 PSTPIP1O43586 416 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 STC2O76061 302 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 MOCS3O95396 460 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 ADH5P11766 374 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 CHKAP35790 457 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 PXNP49023 591 aaPredicted RBP16.64■□□□□ 0.25
ATG4D-205ENST00000586477 SCAPQ12770 1279 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 FBXO43Q4G163 708 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 Q6ZNB5 142 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 ERMP1Q7Z2K6 904 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 PEX26Q7Z412 305 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 SLFN11Q7Z7L1 901 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 WDR5BQ86VZ2 330 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 LONP2Q86WA8 852 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 RHOT1Q8IXI2 618 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 USP33Q8TEY7 942 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 TEKT4Q8WW24 435 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 BTBD6Q96KE9 485 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 FCRL2Q96LA5 508 aaPredicted RBP16.64■□□□□ 0.25
ATG4D-205ENST00000586477 HAPLN3Q96S86 360 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 TRIM7Q9C029 511 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 ARHGEF38Q9NXL2 777 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 TRIM10Q9UDY6 481 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 SALL4Q9UJQ4 1053 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 AMFRQ9UKV5 643 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 USP18Q9UMW8 372 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 ALG6Q9Y672 507 aa16.64■□□□□ 0.25
ATG4D-205ENST00000586477 A0A0A0MRY4 1105 aa16.63■□□□□ 0.25
ATG4D-205ENST00000586477 CCDC66A2RUB6 948 aa16.63■□□□□ 0.25
ATG4D-205ENST00000586477 TYW5A2RUC4 315 aaKnown RBP16.63■□□□□ 0.25
ATG4D-205ENST00000586477 GRID2IPA4D2P6 1211 aa16.63■□□□□ 0.25
ATG4D-205ENST00000586477 KCNU1A8MYU2 1149 aa16.63■□□□□ 0.25
ATG4D-205ENST00000586477 TRIM24O15164 1050 aa16.63■□□□□ 0.25
ATG4D-205ENST00000586477 HOXC11O43248 304 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms