RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 PNKPQ96T60 521 aa13.52□□□□□ -0.25
DNMT1-205ENST00000585920 DNAJC17Q9NVM6 304 aaKnown RBP13.52□□□□□ -0.25
DNMT1-205ENST00000585920 OR12D3Q9UGF7 316 aa13.52□□□□□ -0.25
DNMT1-205ENST00000585920 VANGL2Q9ULK5 521 aa13.52□□□□□ -0.25
DNMT1-205ENST00000585920 FZD10Q9ULW2 581 aa13.52□□□□□ -0.25
DNMT1-205ENST00000585920 USP18Q9UMW8 372 aa13.52□□□□□ -0.25
DNMT1-205ENST00000585920 NDRG2Q9UN36 371 aaKnown RBP13.52□□□□□ -0.25
DNMT1-205ENST00000585920 FAM170BA6NMN3 283 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 PJA2O43164 708 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 CACNG3O60359 315 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 TULP3O75386 442 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 MAN1A1P33908 653 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 OPRD1P41143 372 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 EIF2DP41214 584 aaKnown RBP13.51□□□□□ -0.25
DNMT1-205ENST00000585920 GCGRP47871 477 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 HADHBP55084 474 aaKnown RBP13.51□□□□□ -0.25
DNMT1-205ENST00000585920 RPS24P62847 133 aaKnown RBP13.51□□□□□ -0.25
DNMT1-205ENST00000585920 SCAPQ12770 1279 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 UBXN2BQ14CS0 331 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 GAB4Q2WGN9 574 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 BOLA3Q53S33 107 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 TTC39BQ5VTQ0 682 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-205ENST00000585920 DAB2IPQ5VWQ8 1189 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 GRAMD4Q6IC98 578 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 TXNDC11Q6PKC3 985 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 C12orf40Q86WS4 652 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 CARNMT1Q8N4J0 409 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 ZNF557Q8N988 423 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-205ENST00000585920 CHFRQ96EP1 664 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 MYEOVQ96EZ4 313 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 CALR3Q96L12 384 aaKnown RBP13.51□□□□□ -0.25
DNMT1-205ENST00000585920 PRICKLE1Q96MT3 831 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-205ENST00000585920 SLC2A11Q9BYW1 496 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 LACRTQ9GZZ8 138 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 ZWILCHQ9H900 591 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 TBC1D17Q9HA65 648 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 ARHGEF4Q9NR80 690 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 DUSP10Q9Y6W6 482 aa13.51□□□□□ -0.25
DNMT1-205ENST00000585920 HELZP42694 1942 aaKnown RBP13.51□□□□□ -0.25
DNMT1-205ENST00000585920 DRGXA6NNA5 263 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 BTNL10A8MVZ5 291 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 E9PAM4 449 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 H0Y626 953 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 DLL1O00548 723 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 NCAM2O15394 837 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 BUB1O43683 1085 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 APODP05090 189 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 CCDC175P0C221 793 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 DRD1P21728 446 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 HOXD9P28356 352 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-205ENST00000585920 L1CAMP32004 1257 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 SLC1A1P43005 524 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 DGKGP49619 791 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 SGSHP51688 502 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 IFI16Q16666 785 aaKnown RBP13.5□□□□□ -0.25
DNMT1-205ENST00000585920 QPCTQ16769 361 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 NAIF1Q69YI7 327 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-205ENST00000585920 RWDD4Q6NW29 188 aaKnown RBP13.5□□□□□ -0.25
DNMT1-205ENST00000585920 PSTKQ8IV42 348 aaKnown RBP13.5□□□□□ -0.25
DNMT1-205ENST00000585920 SUGP1Q8IWZ8 645 aaKnown RBP13.5□□□□□ -0.25
DNMT1-205ENST00000585920 ETFBKMTQ8IXQ9 262 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 IGSF8Q969P0 613 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 PBXIP1Q96AQ6 731 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 P2RY11Q96G91 374 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 ZNF830Q96NB3 372 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-205ENST00000585920 MAGEB5Q9BZ81 275 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 DHX35Q9H5Z1 703 aaKnown RBP13.5□□□□□ -0.25
DNMT1-205ENST00000585920 FBRSL1Q9HCM7 1045 aaKnown RBP13.5□□□□□ -0.25
DNMT1-205ENST00000585920 LTB4R2Q9NPC1 389 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 FBXO10Q9UK96 956 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 AP4E1Q9UPM8 1137 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 VPS9D1Q9Y2B5 631 aa13.5□□□□□ -0.25
DNMT1-205ENST00000585920 VCANP13611 3396 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-205ENST00000585920 TBC1D3BA6NDS4 549 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 SHISA7A6NL88 538 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 FAM72CH0Y354 149 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 CREB3O43889 395 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 CLDN11O75508 207 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 KAT7O95251 611 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 CISD3P0C7P0 127 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 GRIA2P42262 883 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 CDH4P55283 916 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 NRG1Q02297 640 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-205ENST00000585920 KDSRQ06136 332 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 ZNF177Q13360 481 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-205ENST00000585920 CDH18Q13634 790 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 C5orf22Q49AR2 442 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 TMEM196Q5HYL7 178 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 KCNT1Q5JUK3 1230 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 FAM72AQ5TYM5 149 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 FAM72DQ6L9T8 149 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 FAM72BQ86X60 149 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 CIR1Q86X95 450 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-205ENST00000585920 MFN1Q8IWA4 741 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 ZNF683Q8IZ20 524 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 CCAR2Q8N163 923 aaKnown RBP13.49□□□□□ -0.25
DNMT1-205ENST00000585920 PYROXD2Q8N2H3 581 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 FIBINQ8TAL6 211 aa13.49□□□□□ -0.25
DNMT1-205ENST00000585920 HSPH1Q92598 858 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms