RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 UAP1Q16222 522 aaPredicted RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 PSMD5Q16401 504 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 RTP2Q5QGT7 225 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 CEP85LQ5SZL2 805 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 C6orf118Q5T5N4 469 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 RNASEH2BQ5TBB1 312 aaKnown RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 AGBL2Q5U5Z8 902 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 PLPP4Q5VZY2 271 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 SYCE2Q6PIF2 218 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 RFX8Q6ZV50 586 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 CENPUQ71F23 418 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 TADA2BQ86TJ2 420 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 DDX53Q86TM3 631 aaKnown RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 ZC3H18Q86VM9 953 aaKnown RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 UNC45BQ8IWX7 931 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 LZTR1Q8N653 840 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 FAM71DQ8N9W8 422 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 ATAD1Q8NBU5 361 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 TFB1MQ8WVM0 346 aaKnown RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 OVCA2Q8WZ82 227 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 EDEM1Q92611 657 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 TMEM169Q96HH4 297 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 C1orf74Q96LT6 269 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 TCF25Q9BQ70 676 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 HERC2P3Q9BVR0 1158 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 STMN4Q9H169 189 aaPredicted RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 ADAM7Q9H2U9 754 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 TMBIM4Q9HC24 238 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 ARHGEF4Q9NR80 690 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 TLR8Q9NR97 1041 aaKnown RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 COX16Q9P0S2 106 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 CALCOCO1Q9P1Z2 691 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 SAE1Q9UBE0 346 aaPredicted RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 AFF4Q9UHB7 1163 aaKnown RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 SLC12A6Q9UHW9 1150 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 GOLGA6CA6NDK9 693 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 NT5C1B-RDH14C9J2C7 533 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 DCLK1O15075 740 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 ALOX15BO15296 676 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 CHADO15335 359 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 KCNN4O15554 427 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 RIPK2O43353 540 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 CREB3O43889 395 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 RNF40O75150 1001 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 CACNA1HO95180 2353 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 TTC4O95801 387 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 ZSCAN5DPP0CG00 497 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 GOLGA6DP0CG33 693 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 PTPRDP23468 1912 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 GLUD2P49448 558 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 ARPP19P56211 112 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 ARL4CP56559 192 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 COG7P83436 770 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 ZXDAP98168 799 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 DSG1Q02413 1049 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 ZNF33AQ06730 810 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 DDR2Q16832 855 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 MGAT5BQ3V5L5 792 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 NCBP2-AS2Q69YL0 99 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 HEATR6Q6AI08 1181 aaKnown RBP10.71□□□□□ -0.69
LIG3-203ENST00000585370 ANKRD54Q6NXT1 300 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 NPNTQ6UXI9 565 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 TRIM67Q6ZTA4 783 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 BMP8AQ7Z5Y6 402 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 SCD5Q86SK9 330 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 TAC4Q86UU9 113 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 CCDC25Q86WR0 208 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 LRRC49Q8IUZ0 686 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 SLC39A11Q8N1S5 342 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 PDZD8Q8NEN9 1154 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 RIN2Q8WYP3 895 aaPredicted RBP10.71□□□□□ -0.69
LIG3-203ENST00000585370 FBXO32Q969P5 355 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 OLFM3Q96PB7 478 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 QKIQ96PU8 341 aaKnown RBP eCLIP10.71□□□□□ -0.69
LIG3-203ENST00000585370 RBM15Q96T37 977 aaKnown RBP eCLIP10.71□□□□□ -0.69
LIG3-203ENST00000585370 TTLL2Q9BWV7 592 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 KLC2Q9H0B6 622 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 TKTL2Q9H0I9 626 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 KCNH6Q9H252 994 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 SEMA4AQ9H3S1 761 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 PPCSQ9HAB8 311 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 ENTPD7Q9NQZ7 604 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.71□□□□□ -0.69
LIG3-203ENST00000585370 GOLGA6AQ9NYA3 693 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 DTLQ9NZJ0 730 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 FNIP2Q9P278 1114 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 OR12D3Q9UGF7 316 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 TLR6Q9Y2C9 796 aa10.71□□□□□ -0.69
LIG3-203ENST00000585370 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
LIG3-203ENST00000585370 VPS13AQ96RL7 3174 aa10.71□□□□□ -0.7
LIG3-203ENST00000585370 CFAP54Q96N23 3096 aa10.71□□□□□ -0.7
LIG3-203ENST00000585370 A0A1W2PQH9 124 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 TMEM221A6NGB7 291 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 M0R296 226 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 POLR3GO15318 223 aaPredicted RBP10.7□□□□□ -0.7
LIG3-203ENST00000585370 FGF10O15520 208 aaPredicted RBP10.7□□□□□ -0.7
LIG3-203ENST00000585370 TCEA3O75764 348 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 ABLIM3O94929 683 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 ABHD2P08910 425 aa10.7□□□□□ -0.7
LIG3-203ENST00000585370 CSH1P0DML2 217 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms