RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 CATSPERBQ9H7T0 1116 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 UBE2ZQ9H832 354 aaPredicted RBP16.64■□□□□ 0.25
SS18-226ENST00000585241 ETNK2Q9NVF9 386 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 TMEM248Q9NWD8 314 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 STIM2Q9P246 746 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 ZNF212Q9UDV6 495 aa16.64■□□□□ 0.25
SS18-226ENST00000585241 KIF26AQ9ULI4 1882 aaPredicted RBP16.63■□□□□ 0.25
SS18-226ENST00000585241 GOLGA6L10A0A0M3HER8 536 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 CTAGE15A4D2H0 777 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 KRIT1O00522 736 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 CTAGE8P0CG41 777 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 FOSL2P15408 326 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 FCARP24071 287 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 TTC39BQ5VTQ0 682 aaPredicted RBP16.63■□□□□ 0.25
SS18-226ENST00000585241 EP400NLQ6ZTU2 488 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 CTAGE6Q86UF2 777 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 BBS7Q8IWZ6 715 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 CTAGE4Q8IX94 777 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 LGI2Q8N0V4 545 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 DEFB123Q8N688 67 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 SLC35B2Q8TB61 432 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 OTUB2Q96DC9 234 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 RSPRY1Q96DX4 576 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 MYADMQ96S97 322 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 KLC2Q9H0B6 622 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 LRRC19Q9H756 370 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 HOMER3Q9NSC5 361 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 RBM12Q9NTZ6 932 aaKnown RBP16.63■□□□□ 0.25
SS18-226ENST00000585241 TBC1D14Q9P2M4 693 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 R3HDM2Q9Y2K5 976 aaKnown RBP16.63■□□□□ 0.25
SS18-226ENST00000585241 USP15Q9Y4E8 981 aaPredicted RBP16.63■□□□□ 0.25
SS18-226ENST00000585241 RAD54BQ9Y620 910 aa16.63■□□□□ 0.25
SS18-226ENST00000585241 DAPK3O43293 454 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 PHF2O75151 1096 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 PECAM1P16284 738 aaPredicted RBP16.62■□□□□ 0.25
SS18-226ENST00000585241 CHKAP35790 457 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 NR2C2P49116 596 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 IRAK1P51617 712 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 DYNLT1P63172 113 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 SMAD4Q13485 552 aaKnown RBP16.62■□□□□ 0.25
SS18-226ENST00000585241 NOMO1Q15155 1222 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 CCNG2Q16589 344 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 RABGAP1LQ5R372 815 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 AFMIDQ63HM1 303 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 RWDD4Q6NW29 188 aaKnown RBP16.62■□□□□ 0.25
SS18-226ENST00000585241 RFWD3Q6PCD5 774 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 TMCO3Q6UWJ1 677 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 CHST9Q7L1S5 443 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 ADAT2Q7Z6V5 191 aaKnown RBP16.62■□□□□ 0.25
SS18-226ENST00000585241 LZTR1Q8N653 840 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 ACTL9Q8TC94 416 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 NKD2Q969F2 451 aaPredicted RBP16.62■□□□□ 0.25
SS18-226ENST00000585241 E2F7Q96AV8 911 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 RPRD1AQ96P16 312 aaPredicted RBP16.62■□□□□ 0.25
SS18-226ENST00000585241 OLFM3Q96PB7 478 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 AP1M1Q9BXS5 423 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 DONSONQ9NYP3 566 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 MFHAS1Q9Y4C4 1052 aa16.62■□□□□ 0.25
SS18-226ENST00000585241 REV3LO60673 3130 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 GRXCR2A6NFK2 248 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 RIOK3O14730 519 aaKnown RBP16.61■□□□□ 0.25
SS18-226ENST00000585241 SLC9A3R1O14745 358 aaPredicted RBP16.61■□□□□ 0.25
SS18-226ENST00000585241 MFSD11O43934 449 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 CNTN5O94779 1100 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 SLU7O95391 586 aaKnown RBP16.61■□□□□ 0.25
SS18-226ENST00000585241 SERPINB6P35237 376 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 MAPKAPK2P49137 400 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 FNTAP49354 379 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 OTUD4Q01804 1114 aaKnown RBP16.61■□□□□ 0.25
SS18-226ENST00000585241 GBE1Q04446 702 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 C2orf54Q08AI8 447 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 ALFQ53S48 1182 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 MPP7Q5T2T1 576 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 UMODL1-AS1Q8N2C9 162 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 MMGT1Q8N4V1 131 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 NPWQ8N729 165 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 P3H4Q92791 437 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 LRRC3BQ96PB8 259 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 DTLQ9NZJ0 730 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 MPP6Q9NZW5 540 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 EPS15L1Q9UBC2 864 aa16.61■□□□□ 0.25
SS18-226ENST00000585241 SZT2Q5T011 3432 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 A0A1B0GVM2 712 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 TCAF2A6NFQ2 919 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 H3BQ06 376 aaPredicted RBP16.6■□□□□ 0.25
SS18-226ENST00000585241 MBTPS2O43462 519 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 LIASO43766 372 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 CLDN11O75508 207 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 LAMP2P13473 410 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 CHRNA3P32297 505 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 VIPR2P41587 438 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 CDH4P55283 916 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 SLC10A2Q12908 348 aaPredicted RBP16.6■□□□□ 0.25
SS18-226ENST00000585241 XRCC4Q13426 336 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 OASLQ15646 514 aaKnown RBP16.6■□□□□ 0.25
SS18-226ENST00000585241 NPNTQ6UXI9 565 aa16.6■□□□□ 0.25
SS18-226ENST00000585241 BZW1Q7L1Q6 419 aaKnown RBP16.6■□□□□ 0.25
SS18-226ENST00000585241 TDRD5Q8NAT2 981 aaKnown RBP16.6■□□□□ 0.25
SS18-226ENST00000585241 HJURPQ8NCD3 748 aaPredicted RBP16.6■□□□□ 0.25
SS18-226ENST00000585241 LRRN4CLQ8ND94 238 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms