RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 CER1O95813 267 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 TRUB2O95900 331 aaKnown RBP21.16■□□□□ 0.98
TOP3A-219ENST00000584887 ASLP04424 464 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 SLC9A1P19634 815 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 MATKP42679 507 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 MTIF2P46199 727 aaKnown RBP21.16■□□□□ 0.98
TOP3A-219ENST00000584887 PDCLQ13371 301 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 HNRNPDQ14103 355 aaKnown RBP21.16■□□□□ 0.98
TOP3A-219ENST00000584887 GBP6Q6ZN66 633 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 PASD1Q8IV76 773 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 DHX40Q8IX18 779 aaKnown RBP21.16■□□□□ 0.98
TOP3A-219ENST00000584887 LMLNQ96KR4 655 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 MED15Q96RN5 788 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 POPDC2Q9HBU9 364 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 COX16Q9P0S2 106 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 KLK13Q9UKR3 277 aa21.16■□□□□ 0.98
TOP3A-219ENST00000584887 INTS6Q9UL03 887 aaKnown RBP21.16■□□□□ 0.98
TOP3A-219ENST00000584887 MOCS3O95396 460 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 TACR2P21452 398 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 CSNK1EP49674 416 aaKnown RBP21.15■□□□□ 0.98
TOP3A-219ENST00000584887 NUMBP49757 651 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 UBE2HP62256 183 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 YWHAZP63104 245 aaKnown RBP21.15■□□□□ 0.98
TOP3A-219ENST00000584887 PITX1P78337 314 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-219ENST00000584887 ZBTB16Q05516 673 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 TRIP6Q15654 476 aaKnown RBP21.15■□□□□ 0.98
TOP3A-219ENST00000584887 MEA1Q16626 185 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 TPD52L1Q16890 204 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-219ENST00000584887 FSCBQ5H9T9 825 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 PITRM1Q5JRX3 1037 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 CHCHD4Q8N4Q1 142 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 SETD7Q8WTS6 366 aaKnown RBP21.15■□□□□ 0.98
TOP3A-219ENST00000584887 TTC17Q96AE7 1141 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 FAM81BQ96LP2 452 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 THAP9Q9H5L6 903 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 FNDC3AQ9Y2H6 1198 aaKnown RBP21.15■□□□□ 0.98
TOP3A-219ENST00000584887 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-219ENST00000584887 SLCO1B1Q9Y6L6 691 aa21.15■□□□□ 0.98
TOP3A-219ENST00000584887 FAM47DPA6NHR8 397 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 BECN2A8MW95 431 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 F5H5T6 163 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 RNASEH1O60930 286 aaKnown RBP21.14■□□□□ 0.97
TOP3A-219ENST00000584887 SIN3BO75182 1162 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 CTSOP43234 321 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-219ENST00000584887 BNC1Q01954 994 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 TAF5Q15542 800 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 TEAD4Q15561 434 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 EXOC3L4Q17RC7 722 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 ZNF423Q2M1K9 1284 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 HLA-BQ31612 363 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 RNF219Q5W0B1 726 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-219ENST00000584887 IL27RAQ6UWB1 636 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 BEND5Q7L4P6 421 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 TMEM110Q86TL2 294 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 ATP6V0D2Q8N8Y2 350 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 RNF34Q969K3 372 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 BTN2A3PQ96KV6 586 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 PABPC3Q9H361 631 aaKnown RBP21.14■□□□□ 0.97
TOP3A-219ENST00000584887 APEX2Q9UBZ4 518 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 ZMIZ1Q9ULJ6 1067 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 ERVW-1Q9UQF0 538 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 NCKAP1Q9Y2A7 1128 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 NEUROG3Q9Y4Z2 214 aa21.14■□□□□ 0.97
TOP3A-219ENST00000584887 CABIN1Q9Y6J0 2220 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 TRIM16O95361 564 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 AFF3P51826 1226 aaKnown RBP21.13■□□□□ 0.97
TOP3A-219ENST00000584887 CDK17Q00537 523 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 HNRNPA1L2Q32P51 320 aaKnown RBP21.13■□□□□ 0.97
TOP3A-219ENST00000584887 LAYNQ6UX15 382 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 CIR1Q86X95 450 aaPredicted RBP21.13■□□□□ 0.97
TOP3A-219ENST00000584887 C1orf216Q8TAB5 229 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 GATA6Q92908 595 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 BIRC7Q96CA5 298 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 MYO19Q96H55 970 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 MRGPRX3Q96LB0 322 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 RSPH9Q9H1X1 276 aaPredicted RBP21.13■□□□□ 0.97
TOP3A-219ENST00000584887 SGK2Q9HBY8 427 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 TM7SF3Q9NS93 570 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 DDIT4Q9NX09 232 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 FBXL12Q9NXK8 326 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 KIAA1522Q9P206 1035 aaPredicted RBP21.13■□□□□ 0.97
TOP3A-219ENST00000584887 SLC12A6Q9UHW9 1150 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 FRYQ5TBA9 3013 aa21.13■□□□□ 0.97
TOP3A-219ENST00000584887 TTC34A8MYJ7 566 aa21.12■□□□□ 0.97
TOP3A-219ENST00000584887 GRAP2O75791 330 aa21.12■□□□□ 0.97
TOP3A-219ENST00000584887 ADAT2Q7Z6V5 191 aaKnown RBP21.12■□□□□ 0.97
TOP3A-219ENST00000584887 MMAAQ8IVH4 418 aaKnown RBP21.12■□□□□ 0.97
TOP3A-219ENST00000584887 APCDD1Q8J025 514 aa21.12■□□□□ 0.97
TOP3A-219ENST00000584887 DEFB106AQ8N104 65 aa21.12■□□□□ 0.97
TOP3A-219ENST00000584887 ZCCHC14Q8WYQ9 949 aaKnown RBP21.12■□□□□ 0.97
TOP3A-219ENST00000584887 SHC3Q92529 594 aa21.12■□□□□ 0.97
TOP3A-219ENST00000584887 PPP1R13BQ96KQ4 1090 aa21.12■□□□□ 0.97
TOP3A-219ENST00000584887 CPXM1Q96SM3 734 aa21.12■□□□□ 0.97
TOP3A-219ENST00000584887 TMEM121BQ9BXQ6 578 aaPredicted RBP21.12■□□□□ 0.97
TOP3A-219ENST00000584887 TM9SF3Q9HD45 589 aa21.12■□□□□ 0.97
TOP3A-219ENST00000584887 MID1O15344 667 aa21.11■□□□□ 0.97
TOP3A-219ENST00000584887 IGLV3-25P01717 112 aa21.11■□□□□ 0.97
TOP3A-219ENST00000584887 FTH1P19P0C7X4 201 aa21.11■□□□□ 0.97
TOP3A-219ENST00000584887 PDGFRAP16234 1089 aa21.11■□□□□ 0.97
TOP3A-219ENST00000584887 ABCB4P21439 1286 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms