RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 GPS1Q13098 491 aa14.4□□□□□ -0.1
UBBP4-202ENST00000584755 AUHQ13825 339 aaKnown RBP14.4□□□□□ -0.1
UBBP4-202ENST00000584755 RAB30Q15771 203 aa14.4□□□□□ -0.1
UBBP4-202ENST00000584755 PPM1LQ5SGD2 360 aa14.4□□□□□ -0.1
UBBP4-202ENST00000584755 AFMIDQ63HM1 303 aa14.4□□□□□ -0.1
UBBP4-202ENST00000584755 NADSYN1Q6IA69 706 aa14.4□□□□□ -0.1
UBBP4-202ENST00000584755 HIBCHQ6NVY1 386 aaPredicted RBP14.4□□□□□ -0.1
UBBP4-202ENST00000584755 NLRP14Q86W24 1093 aa14.4□□□□□ -0.1
UBBP4-202ENST00000584755 RTL3Q8N8U3 475 aaKnown RBP14.4□□□□□ -0.1
UBBP4-202ENST00000584755 HDAC11Q96DB2 347 aa14.4□□□□□ -0.1
UBBP4-202ENST00000584755 PRDM12Q9H4Q4 367 aa14.4□□□□□ -0.1
UBBP4-202ENST00000584755 VIPAS39Q9H9C1 493 aa14.4□□□□□ -0.1
UBBP4-202ENST00000584755 MAN1C1Q9NR34 630 aa14.4□□□□□ -0.1
UBBP4-202ENST00000584755 MTRF1LQ9UGC7 380 aaKnown RBP14.4□□□□□ -0.1
UBBP4-202ENST00000584755 TPX2Q9ULW0 747 aaKnown RBP14.4□□□□□ -0.1
UBBP4-202ENST00000584755 FARP1Q9Y4F1 1045 aaPredicted RBP14.4□□□□□ -0.1
UBBP4-202ENST00000584755 ACSL4O60488 711 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 PPFIA2O75334 1257 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 STC2O76061 302 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 PAPLNO95428 1278 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 HMBSP08397 361 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 HNRNPA1P09651 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
UBBP4-202ENST00000584755 VAV1P15498 845 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 RHOQP17081 205 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 MX2P20592 715 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 GABRR2P28476 465 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 CDC25CP30307 473 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 PPIDQ08752 370 aaKnown RBP14.39□□□□□ -0.11
UBBP4-202ENST00000584755 MORF4L2Q15014 288 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 RNASEH2BQ5TBB1 312 aaKnown RBP14.39□□□□□ -0.11
UBBP4-202ENST00000584755 IZUMO3Q5VZ72 239 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 RWDD4Q6NW29 188 aaKnown RBP14.39□□□□□ -0.11
UBBP4-202ENST00000584755 FBXL22Q6P050 247 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 C4orf22Q6V702 233 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 B4GALNT4Q76KP1 1039 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 TMC3Q7Z5M5 1100 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 MTERF4Q7Z6M4 381 aaKnown RBP14.39□□□□□ -0.11
UBBP4-202ENST00000584755 ARHGAP12Q8IWW6 846 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 TP53INP2Q8IXH6 220 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 HS6ST3Q8IZP7 471 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 HTR3CQ8WXA8 447 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 GDAP1L1Q96MZ0 367 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 LGMNQ99538 433 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 FOXP3Q9BZS1 431 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 ZYG11BQ9C0D3 744 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 NACA2Q9H009 215 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 RETREG1Q9H6L5 497 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 TMEM248Q9NWD8 314 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 PAK5Q9P286 719 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 ZNF212Q9UDV6 495 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 ANAPC5Q9UJX4 755 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 DOCK4Q8N1I0 1966 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 ATG2AQ2TAZ0 1938 aa14.39□□□□□ -0.11
UBBP4-202ENST00000584755 SMAPO00193 183 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 FGF19O95750 216 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 LATS1O95835 1130 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 EPCAMP16422 314 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 BMP8BP34820 402 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 TNNT3P45378 269 aaPredicted RBP14.38□□□□□ -0.11
UBBP4-202ENST00000584755 HARS2P49590 506 aaKnown RBP14.38□□□□□ -0.11
UBBP4-202ENST00000584755 NRLP54845 237 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 FAM133BQ5BKY9 247 aaKnown RBP14.38□□□□□ -0.11
UBBP4-202ENST00000584755 SPDYCQ5MJ68 293 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 RAP1GAP2Q684P5 730 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 HEATR6Q6AI08 1181 aaKnown RBP14.38□□□□□ -0.11
UBBP4-202ENST00000584755 LRRC31Q6UY01 552 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 PCGF5Q86SE9 256 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 HOOK3Q86VS8 718 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 UMODL1-AS1Q8N2C9 162 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 MRPS31Q92665 395 aaKnown RBP14.38□□□□□ -0.11
UBBP4-202ENST00000584755 TSGA13Q96PP4 275 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 TSPYL1Q9H0U9 437 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 ASAH2Q9NR71 780 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 DONSONQ9NYP3 566 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 MSRAQ9UJ68 235 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 STOML2Q9UJZ1 356 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 VANGL2Q9ULK5 521 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 SHOC2Q9UQ13 582 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 SOBPA7XYQ1 873 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 CCL16O15467 120 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 GREM1O60565 184 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 RFPL2O75678 378 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 CSPG5O95196 566 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 KLKB1P03952 638 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 TACR2P21452 398 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 GARSP41250 739 aaKnown RBP14.38□□□□□ -0.11
UBBP4-202ENST00000584755 MAGEA6P43360 314 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 SLC11A2P49281 568 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 SLC7A9P82251 487 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 TXNDC8Q6A555 127 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 CHSY1Q86X52 802 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 LRRC49Q8IUZ0 686 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 NAT8LQ8N9F0 302 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 LEMD2Q8NC56 503 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 TSEN2Q8NCE0 465 aaKnown RBP14.38□□□□□ -0.11
UBBP4-202ENST00000584755 ADAMTS19Q8TE59 1207 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 CPT1BQ92523 772 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 IGSF8Q969P0 613 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 P2RY11Q96G91 374 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 SLC22A12Q96S37 553 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms