RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377		M0QYT0	321 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	OPHN1	O60890	802 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	BEST1	O76090	585 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	WARS	P23381	471 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CRHR1	P34998	444 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NOS2	P35228	1153 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SESN3	P58005	492 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ADAM17	P78536	824 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NME3	Q13232	169 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CYS1	Q717R9	158 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	UNC5B	Q8IZJ1	945 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CCNY	Q8ND76	341 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PTCD3	Q96EY7	689 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GBP5	Q96PP8	586 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MIPEP	Q99797	713 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	FERMT1	Q9BQL6	677 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CEP41	Q9BYV8	373 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	FAM192A	Q9GZU8	254 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PIH1D1	Q9NWS0	290 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SEPT10	Q9P0V9	454 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	STAP1	Q9ULZ2	295 aa		13.59	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MYO18A	Q92614	2054 aa	Known RBP	13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SKI	P12755	728 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	VHL	P40337	213 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NDUFV1	P49821	464 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SESN2	P58004	480 aa	Predicted RBP	13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	BSPRY	Q5W0U4	402 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	STEAP4	Q687X5	459 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	LRRC8B	Q6P9F7	803 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SIX6OS1	Q8N1H7	587 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NME8	Q8N427	588 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NSL1	Q96IY1	281 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PRDM16	Q9HAZ2	1276 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	STOML1	Q9UBI4	398 aa		13.58	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ALDH1A2	O94788	518 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	PTPN1	P18031	435 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	CNTF	P26441	200 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	PSEN2	P49810	448 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	PDK1	Q15118	436 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	OLFML2B	Q68BL8	750 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	TTC7B	Q86TV6	843 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	SMG8	Q8ND04	991 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	STKLD1	Q8NE28	680 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	SH3TC2	Q8TF17	1288 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	NT5C3B	Q969T7	300 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	AZIN2	Q96A70	460 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	NPY6R	Q99463	290 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	BTBD10	Q9BSF8	475 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	EIF2B3	Q9NR50	452 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	KCNK4	Q9NYG8	393 aa		13.58	□□□□□ -0.24
CSNK1D-222	ENST00000584377	MGAT1	P26572	445 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	GLUD2	P49448	558 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	OCRL	Q01968	901 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	DEUP1	Q05D60	604 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	SYPL2	Q5VXT5	272 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	CES4A	Q5XG92	561 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	WSCD1	Q658N2	575 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	TWF2	Q6IBS0	349 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	TIFAB	Q6ZNK6	161 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	PAQR9	Q6ZVX9	377 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	MYLK4	Q86YV6	388 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	CDKL2	Q92772	493 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	PTPN18	Q99952	460 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	SYT17	Q9BSW7	474 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	MED10	Q9BTT4	135 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	VCX3B	Q9H321	246 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	PRDM12	Q9H4Q4	367 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	VCX3A	Q9NNX9	186 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	SLC17A6	Q9P2U8	582 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	MAGEA13P	A6NCF6	341 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	IQCA1L	A6NCM1	817 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	GLTPD2	A6NH11	291 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	FCHO1	O14526	889 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	CAPN15	O75808	1086 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	TOP3B	O95985	862 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	PENK	P01210	267 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	BPGM	P07738	259 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	PSMB4	P28070	264 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	CRYBB1	P53674	252 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	PDCD11	Q14690	1871 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	TEX44	Q53QW1	395 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	MDH1B	Q5I0G3	518 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	RASIP1	Q5U651	963 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	CLEC20A	Q6ZU45	233 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	MARK2	Q7KZI7	788 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	ALYREF	Q86V81	257 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	LCA5	Q86VQ0	697 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	KCTD13	Q8WZ19	329 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	GATA6	Q92908	595 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	WNT8B	Q93098	351 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	ZFP42	Q96MM3	310 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	CADM1	Q9BY67	442 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	NMUR2	Q9GZQ4	415 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	PIGV	Q9NUD9	493 aa		13.57	□□□□□ -0.24
CSNK1D-222	ENST00000584377	RPL26L1	Q9UNX3	145 aa	Known RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms