RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 GAREM1Q9H706 876 aa10.12□□□□□ -0.79
CDK5RAP3-227ENST00000583352 SIX2Q9NPC8 291 aa10.12□□□□□ -0.79
CDK5RAP3-227ENST00000583352 FAM207AQ9NSI2 230 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-227ENST00000583352 OLA1Q9NTK5 396 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-227ENST00000583352 REXO2Q9Y3B8 237 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CACNA1EQ15878 2313 aa10.12□□□□□ -0.79
CDK5RAP3-227ENST00000583352 GOLGA6L9A6NEM1 432 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 TAF4O00268 1085 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 PMM2O15305 246 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CBFA2T3O75081 653 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ZBED1O96006 694 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 HOXB3P14651 431 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ARHGAP25P42331 645 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 MXI1P50539 228 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 TKTL1P51854 596 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 COPAP53621 1224 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 RAD23BP54727 409 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ETF1P62495 437 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 APBA1Q02410 837 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 MPPE1Q53F39 396 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 RAB41Q5JT25 222 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ZNF662Q6ZS27 426 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 RRAGAQ7L523 313 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 GLRX5Q86SX6 157 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CACUL1Q86Y37 369 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 FAM217AQ8IXS0 508 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CCDC170Q8IYT3 715 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 PNPLA1Q8N8W4 532 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ANKRD52Q8NB46 1076 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 SLC4A11Q8NBS3 891 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 RBBP8NLQ8NC74 664 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 FBXL13Q8NEE6 735 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 OR2T3Q8NH03 318 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 WFIKKN2Q8TEU8 576 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 SORCS1Q8WY21 1168 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 SNX19Q92543 992 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ARID3AQ99856 593 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 LHX5Q9H2C1 402 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 IL21RQ9HBE5 538 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 TM7SF3Q9NS93 570 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CISHQ9NSE2 258 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ZNHIT6Q9NWK9 470 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 AIPL1Q9NZN9 384 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 EIF2B4Q9UI10 523 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 PCOLCE2Q9UKZ9 415 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CLEC4EQ9ULY5 219 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 PAXBP1Q9Y5B6 917 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CKAP5Q14008 2032 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 FAM208BQ5VWN6 2430 aa10.11□□□□□ -0.79
CDK5RAP3-227ENST00000583352 A0A0U1RQJ8 604 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 EIF3CLB5ME19 914 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 FLRT2O43155 660 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 NDUFA10O95299 355 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CAPNS1P04632 268 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CCDC175P0C221 793 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 HLA-EP13747 358 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 HARS2P49590 506 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 POLR2FP61218 127 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 MAPK8IP2Q13387 824 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 TRIP4Q15650 581 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 EXOC3L4Q17RC7 722 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 GOLGA7BQ2TAP0 167 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ASTE1Q2TB18 679 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 HLA-BQ31612 363 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 FNDC3BQ53EP0 1204 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 HGSNATQ68CP4 663 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 TMEM215Q68D42 235 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 PM20D1Q6GTS8 502 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CCNI2Q6ZMN8 369 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 GBP6Q6ZN66 633 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 FAM124AQ86V42 546 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 FMNL3Q8IVF7 1028 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 EHBP1Q8NDI1 1231 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ACRBPQ8NEB7 543 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 LMO3Q8TAP4 145 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 RNF139Q8WU17 664 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 SEMA4DQ92854 862 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 EIF3CQ99613 913 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ULBP1Q9BZM6 244 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 NUCKS1Q9H1E3 243 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 CCDC86Q9H6F5 360 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 NHEJ1Q9H9Q4 299 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 LRRC4Q9HBW1 653 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 RAB20Q9NX57 234 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 KIAA1522Q9P206 1035 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 ARHGAP20Q9P2F6 1191 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 HESX1Q9UBX0 185 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 PLA2G4CQ9UP65 541 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 FNDC3AQ9Y2H6 1198 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 HBS1LQ9Y450 684 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 PCDHGB2Q9Y5G2 931 aa10.1□□□□□ -0.79
CDK5RAP3-227ENST00000583352 A0A1B0GVT2 93 aa10.09□□□□□ -0.79
CDK5RAP3-227ENST00000583352 LRRC53A6NM62 1247 aa10.09□□□□□ -0.79
CDK5RAP3-227ENST00000583352 XPO1O14980 1071 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP3-227ENST00000583352 P4HA2O15460 535 aa10.09□□□□□ -0.79
CDK5RAP3-227ENST00000583352 TSPAN3O60637 253 aa10.09□□□□□ -0.79
CDK5RAP3-227ENST00000583352 LCA5LO95447 670 aa10.09□□□□□ -0.79
CDK5RAP3-227ENST00000583352 LATS1O95835 1130 aa10.09□□□□□ -0.79
CDK5RAP3-227ENST00000583352 HOXD9P28356 352 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP3-227ENST00000583352 EIF4A3P38919 411 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms