RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	KIF1C	O43896	1103 aa	Known RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	CSF2	P04141	144 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	CYP11A1	P05108	521 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	FGF3	P11487	239 aa	Predicted RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	HSPA4	P34932	840 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	CHRNA4	P43681	627 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	PPP3CC	P48454	512 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	VAMP7	P51809	220 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	ADPRH	P54922	357 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	MFAP3	P55082	362 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	RAB15	P59190	212 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	CCL7	P80098	99 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	SLFN5	Q08AF3	891 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	LAMB3	Q13751	1172 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	STAT4	Q14765	748 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	EMC2	Q15006	297 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	SAFB	Q15424	915 aa	Known RBP eCLIP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	CDSN	Q15517	529 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	PRR31	Q5SQ13	230 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	PHF19	Q5T6S3	580 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	ZNF776	Q68DI1	518 aa	Predicted RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	PLEKHA7	Q6IQ23	1121 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	B3GNT9	Q6UX72	402 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	SERPINA13P	Q6UXR4	307 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	SKAP1	Q86WV1	359 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	HIPK1	Q86Z02	1210 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	BBS7	Q8IWZ6	715 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	UNC5B	Q8IZJ1	945 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	STKLD1	Q8NE28	680 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	ACRBP	Q8NEB7	543 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	CCDC112	Q8NEF3	446 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	FAM131C	Q96AQ9	280 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	RIT2	Q99578	217 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	SMAD5	Q99717	465 aa	Known RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	ANO3	Q9BYT9	981 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	CPEB1	Q9BZB8	566 aa	Known RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	LRRN3	Q9H3W5	708 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	SYNDIG1	Q9H7V2	258 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	TTC12	Q9H892	705 aa	Predicted RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	ABCB6	Q9NP58	842 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	DDX43	Q9NXZ2	648 aa	Known RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	AKAP7	Q9P0M2	348 aa	Predicted RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	CNTN3	Q9P232	1028 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	C5AR2	Q9P296	337 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	PADI4	Q9UM07	663 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	NAALADL1	Q9UQQ1	740 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	GDA	Q9Y2T3	454 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	PCDHGC4	Q9Y5F7	938 aa		5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	MRPS18B	Q9Y676	258 aa	Known RBP	5.23	□□□□□ -1.57
MSI2-216	ENST00000582772	FAM47DP	A6NHR8	397 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	AQP9	O43315	295 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	VENTX	O95231	258 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	FGA	P02671	866 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	PYGB	P11216	843 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	PLCG1	P19174	1290 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	F8A1	P23610	371 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	PAX3	P23760	479 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	LRPAP1	P30533	357 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	GPR15	P49685	360 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	CLCN6	P51797	869 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	DGKQ	P52824	942 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	PPP2CB	P62714	309 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	PPP2CA	P67775	309 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	ADORA2A-AS1	P86434	159 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	AP3B2	Q13367	1082 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	SEC23A	Q15436	765 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	GEN1	Q17RS7	908 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	ARSH	Q5FYA8	562 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	UBAP2	Q5T6F2	1119 aa	Known RBP	5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	IFIT1B	Q5T764	474 aa	Known RBP	5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	LCE2D	Q5TA82	110 aa	Predicted RBP	5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	VPS53	Q5VIR6	699 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	PLA2G4F	Q68DD2	849 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	IGFL3	Q6UXB1	125 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	TMEM135	Q86UB9	458 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	SLC22A18AS	Q8N1D0	253 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	SDR16C5	Q8N3Y7	309 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	OR6C4	Q8NGE1	309 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	THAP4	Q8WY91	577 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	INPP5D	Q92835	1189 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	CCDC74A	Q96AQ1	378 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	PPP1R13B	Q96KQ4	1090 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	TBATA	Q96M53	351 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	CEP295NL	Q96MC4	621 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	BBS2	Q9BXC9	721 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	LIME1	Q9H400	295 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	PLEKHA5	Q9HAU0	1116 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	ELOVL2	Q9NXB9	296 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	SMPD4	Q9NXE4	827 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	FBXL12	Q9NXK8	326 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	ABI2	Q9NYB9	513 aa	Predicted RBP	5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	MAPK8IP1	Q9UQF2	711 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	PLEKHA6	Q9Y2H5	1048 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	PCDHGA6	Q9Y5G7	932 aa		5.22	□□□□□ -1.57
MSI2-216	ENST00000582772	ZNF840P	A6NDX5	716 aa		5.21	□□□□□ -1.58
MSI2-216	ENST00000582772		B4E171	279 aa		5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms