RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TRIOO75962 3097 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 COL4A2P08572 1712 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 ZNF487B1APH4 448 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 LOC730098B7Z3J9 87 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 H3BRJ5 948 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 KIF2AO00139 706 aaPredicted RBP9.83□□□□□ -0.84
RFFL-210ENST00000582308 ZNF185O15231 689 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 CNTN5O94779 1100 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 TUBB4AP04350 444 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 CYP17A1P05093 508 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 KRT10P13645 584 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 PRLRP16471 622 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 PSMC3P17980 439 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 EPHB2P29323 1055 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 HTR7P34969 479 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 CHKAP35790 457 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 ARL4AP40617 200 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 IFNAR2P48551 515 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 ZNF135P52742 658 aaPredicted RBP9.83□□□□□ -0.84
RFFL-210ENST00000582308 COPS2P61201 443 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 AMPD2Q01433 879 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 ADCY2Q08462 1091 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 PPP2R5EQ16537 467 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 ALFQ53S48 1182 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 ODF2Q5BJF6 829 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 TFDP3Q5H9I0 405 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 LY6G5CQ5SRR4 150 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 RWDD4Q6NW29 188 aaKnown RBP9.83□□□□□ -0.84
RFFL-210ENST00000582308 RHBDF2Q6PJF5 856 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 LRRC31Q6UY01 552 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 TPGS1Q6ZTW0 290 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 RFX8Q6ZV50 586 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 CIR1Q86X95 450 aaPredicted RBP9.83□□□□□ -0.84
RFFL-210ENST00000582308 VSIG1Q86XK7 387 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 CCDC50Q8IVM0 306 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 PQLC3Q8N755 202 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 DEPDC1BQ8WUY9 529 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 IRF7Q92985 503 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 TBC1D31Q96DN5 1066 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 TMA16Q96EY4 203 aaKnown RBP9.83□□□□□ -0.84
RFFL-210ENST00000582308 MS4A14Q96JA4 679 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 PBKQ96KB5 322 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 RPRD1AQ96P16 312 aaPredicted RBP9.83□□□□□ -0.84
RFFL-210ENST00000582308 RNF157Q96PX1 679 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 ZNF670Q9BS34 389 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 TRMT61BQ9BVS5 477 aaKnown RBP9.83□□□□□ -0.84
RFFL-210ENST00000582308 HEMGNQ9BXL5 484 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 EBF3Q9H4W6 596 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 KCNK12Q9HB15 430 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 HPS4Q9NQG7 708 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 ARHGEF4Q9NR80 690 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 ETNK2Q9NVF9 386 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 THG1LQ9NWX6 298 aaKnown RBP9.83□□□□□ -0.84
RFFL-210ENST00000582308 RCOR3Q9P2K3 495 aaPredicted RBP9.83□□□□□ -0.84
RFFL-210ENST00000582308 PPARGC1AQ9UBK2 798 aaKnown RBP9.83□□□□□ -0.84
RFFL-210ENST00000582308 ZNF212Q9UDV6 495 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 MFHAS1Q9Y4C4 1052 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 KIAA1549LQ6ZVL6 1849 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 COL4A3Q01955 1670 aa9.83□□□□□ -0.84
RFFL-210ENST00000582308 hCG_1818297A0A087WSY0 165 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 TCRBV7S2A1N4TA0A589 114 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 OTOL1A6NHN0 477 aaPredicted RBP9.82□□□□□ -0.84
RFFL-210ENST00000582308 ARNTLO00327 626 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 DCLK1O15075 740 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 CHADO15335 359 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 CEP104O60308 925 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 TBL1XO60907 577 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 ASGR2P07307 311 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 RHOQP17081 205 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 TCP1P17987 556 aaKnown RBP9.82□□□□□ -0.84
RFFL-210ENST00000582308 ERCC2P18074 760 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 HOXD9P28356 352 aaPredicted RBP9.82□□□□□ -0.84
RFFL-210ENST00000582308 GDI1P31150 447 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 PTPN7P35236 360 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 ZP2Q05996 745 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 TNK2Q07912 1038 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 PDGFRLQ15198 375 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 DHCR24Q15392 516 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 AAK1Q2M2I8 961 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 GAB4Q2WGN9 574 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 RABGAP1LQ5R372 815 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 FYB2Q5VWT5 728 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 KAZNQ674X7 775 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 RNF43Q68DV7 783 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 NLRP14Q86W24 1093 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 ADHFE1Q8IWW8 467 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 YAF2Q8IY57 180 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 SLC44A3Q8N4M1 653 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 HJURPQ8NCD3 748 aaPredicted RBP9.82□□□□□ -0.84
RFFL-210ENST00000582308 ZNF592Q92610 1267 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 ATP2A3Q93084 1043 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 BHMTQ93088 406 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 NXPE3Q969Y0 559 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 OSBPL8Q9BZF1 889 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 ZYG11BQ9C0D3 744 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 KLC2Q9H0B6 622 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 SPHK2Q9NRA0 654 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 PLK2Q9NYY3 685 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 STIM2Q9P246 746 aa9.82□□□□□ -0.84
RFFL-210ENST00000582308 IGSF9Q9P2J2 1179 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms