RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 EVA1BQ9NVM1 165 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 FBXL12Q9NXK8 326 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 STOML2Q9UJZ1 356 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 AGO1Q9UL18 857 aaKnown RBP6.51□□□□□ -1.37
TVP23B-210ENST00000582288 DMTF1Q9Y222 760 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 PCDHB1Q9Y5F3 818 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 USP3Q9Y6I4 520 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 MYH10P35580 1976 aa6.51□□□□□ -1.37
TVP23B-210ENST00000582288 PLXNA2O75051 1894 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 A0A1W2PQH9 124 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 TARSL2A2RTX5 802 aaKnown RBP6.5□□□□□ -1.37
TVP23B-210ENST00000582288 CLEC18AA5D8T8 446 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 CDRT15L2A8MXV6 281 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 J3QL48 77 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 TULP1O00294 542 aaPredicted RBP6.5□□□□□ -1.37
TVP23B-210ENST00000582288 CYP26A1O43174 497 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 SIGLEC6O43699 453 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 STX6O43752 255 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 OPA1O60313 960 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 RNGTTO60942 597 aaKnown RBP6.5□□□□□ -1.37
TVP23B-210ENST00000582288 BEST1O76090 585 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 LATS1O95835 1130 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 SLFN14P0C7P3 912 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 FAM200BP0CF97 657 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 P4HA1P13674 534 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 ITGB6P18564 788 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 HOXD9P28356 352 aaPredicted RBP6.5□□□□□ -1.37
TVP23B-210ENST00000582288 RBMS1P29558 406 aaKnown RBP6.5□□□□□ -1.37
TVP23B-210ENST00000582288 DUSP3P51452 185 aaPredicted RBP6.5□□□□□ -1.37
TVP23B-210ENST00000582288 KIF11P52732 1056 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 MAP3K7CLP57077 242 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 MYL6P60660 151 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 CLDN10P78369 228 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 NFATC3Q12968 1075 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 BNIP3Q12983 259 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 KCNJ12Q14500 433 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 ZNF667Q5HYK9 610 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 NAPEPLDQ6IQ20 393 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 NCEH1Q6PIU2 408 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 CLEC18BQ6UXF7 455 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 CLEC20AQ6ZU45 233 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 SV2BQ7L1I2 683 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 SCD5Q86SK9 330 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 CLEC14AQ86T13 490 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 SPATS2Q86XZ4 545 aaKnown RBP6.5□□□□□ -1.37
TVP23B-210ENST00000582288 ARHGAP18Q8N392 663 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 CLEC18CQ8NCF0 446 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 SLC2A14Q8TDB8 520 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 HPS1Q92902 700 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 HPS3Q969F9 1004 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 FAM131CQ96AQ9 280 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 PLD4Q96BZ4 506 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 SERAC1Q96JX3 654 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 UBXN6Q9BZV1 441 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 HSPBP1Q9NZL4 362 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 NCKIPSDQ9NZQ3 722 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 CCDC39Q9UFE4 941 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 NAGPAQ9UK23 515 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 STRIP2Q9ULQ0 834 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 CLEC4EQ9ULY5 219 aa6.5□□□□□ -1.37
TVP23B-210ENST00000582288 TP53BP1Q12888 1972 aaPredicted RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 KNTC1P50748 2209 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 CABIN1Q9Y6J0 2220 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 FAM47DPA6NHR8 397 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ENO4A6NNW6 628 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 TRIM38O00635 465 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 WNT9AO14904 365 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 MDM4O15151 490 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 EIF3DO15371 548 aaKnown RBP eCLIP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 SLC7A4O43246 635 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 CSO75390 466 aaKnown RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ASLP04424 464 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 DLATP10515 647 aaKnown RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ALPPL2P10696 532 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 PABPC1P11940 636 aaKnown RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 GOT1P17174 413 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 POLR2EP19388 210 aaKnown RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 C5AR1P21730 350 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ADPRHP54922 357 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 DAB2P98082 770 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 CYP24A1Q07973 514 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 TRIP4Q15650 581 aaPredicted RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 CST6Q15828 149 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ISXQ2M1V0 245 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 SGSM1Q2NKQ1 1148 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 HNRNPA1L2Q32P51 320 aaKnown RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 LINC00303Q3SY05 128 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ADGRF1Q5T601 910 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 KIAA1614Q5VZ46 1190 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 MBLAC2Q68D91 279 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 MCTP1Q6DN14 999 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 SND1Q7KZF4 910 aaKnown RBP eCLIP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 CHST9Q7L1S5 443 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 GPRIN1Q7Z2K8 1008 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ACOT1Q86TX2 421 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 PRPF39Q86UA1 669 aaKnown RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 DENND1CQ8IV53 801 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 SLC25A45Q8N413 288 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ARL14Q8N4G2 192 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 EXD3Q8N9H8 876 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms