RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 LRRC32Q14392 662 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 FBXO43Q4G163 708 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 MANEALQ5VSG8 457 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 FSTL4Q6MZW2 842 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 CYP4V2Q6ZWL3 525 aaPredicted RBP20.68■□□□□ 0.9
TOP3A-213ENST00000582230 CHST9Q7L1S5 443 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 ZNF687Q8N1G0 1237 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 PHTF2Q8N3S3 785 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 CCDC26Q8TAB7 109 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 TEKT4Q8WW24 435 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 PEBP4Q96S96 227 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 EPAS1Q99814 870 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 SNRNP25Q9BV90 132 aaKnown RBP20.68■□□□□ 0.9
TOP3A-213ENST00000582230 ZYG11BQ9C0D3 744 aa20.68■□□□□ 0.9
TOP3A-213ENST00000582230 FBRSL1Q9HCM7 1045 aaKnown RBP20.68■□□□□ 0.9
TOP3A-213ENST00000582230 H0Y626 953 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 GPR37L1O60883 481 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 PDGFBP01127 241 aaPredicted RBP20.67■□□□□ 0.9
TOP3A-213ENST00000582230 CCDC175P0C221 793 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 IL1R2P27930 398 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 TNFRSF4P43489 277 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 OXCT1P55809 520 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 SLC25A11Q02978 314 aaKnown RBP20.67■□□□□ 0.9
TOP3A-213ENST00000582230 CDH18Q13634 790 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 IFI16Q16666 785 aaKnown RBP20.67■□□□□ 0.9
TOP3A-213ENST00000582230 DAB2IPQ5VWQ8 1189 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 ASTLQ6HA08 431 aaPredicted RBP20.67■□□□□ 0.9
TOP3A-213ENST00000582230 CCAR2Q8N163 923 aaKnown RBP20.67■□□□□ 0.9
TOP3A-213ENST00000582230 SYNPOQ8N3V7 929 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 CARNMT1Q8N4J0 409 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 TERB1Q8NA31 727 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 TSGA10Q9BZW7 698 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 DHX35Q9H5Z1 703 aaKnown RBP20.67■□□□□ 0.9
TOP3A-213ENST00000582230 ZWILCHQ9H900 591 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 CLEC4EQ9ULY5 219 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 MTF2Q9Y483 593 aaPredicted RBP20.67■□□□□ 0.9
TOP3A-213ENST00000582230 DUSP10Q9Y6W6 482 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 NCOR1O75376 2440 aa20.67■□□□□ 0.9
TOP3A-213ENST00000582230 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.66■□□□□ 0.9
TOP3A-213ENST00000582230 TBC1D3BA6NDS4 549 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 FAM72CH0Y354 149 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 LRIG2O94898 1065 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 KRT7P08729 469 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 CHRNB1P11230 501 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 AOC1P19801 751 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 NAP1L1P55209 391 aaKnown RBP20.66■□□□□ 0.9
TOP3A-213ENST00000582230 KDSRQ06136 332 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 SEMA3BQ13214 749 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 ZNF177Q13360 481 aaPredicted RBP20.66■□□□□ 0.9
TOP3A-213ENST00000582230 CCINQ13939 588 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 ARTNQ5T4W7 220 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 FAM72AQ5TYM5 149 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 CWF19L1Q69YN2 538 aaKnown RBP20.66■□□□□ 0.9
TOP3A-213ENST00000582230 FAM72DQ6L9T8 149 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 C11orf63Q6NUN7 778 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 FAM72BQ86X60 149 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 CCDC105Q8IYK2 499 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 PYROXD2Q8N2H3 581 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 FBXL6Q8N531 539 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.66■□□□□ 0.9
TOP3A-213ENST00000582230 CLDN23Q96B33 292 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 TBC1D31Q96DN5 1066 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 PPP1R9BQ96SB3 815 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 MAGEB5Q9BZ81 275 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 LMAN1LQ9HAT1 526 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 SALL4Q9UJQ4 1053 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 COL4A3Q01955 1670 aa20.66■□□□□ 0.9
TOP3A-213ENST00000582230 BDP1A6H8Y1 2624 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 PRR33A8MZF0 331 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 TRIM24O15164 1050 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 CREB3O43889 395 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 BUB1BO60566 1050 aaPredicted RBP20.65■□□□□ 0.9
TOP3A-213ENST00000582230 EGFP01133 1207 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 RARAP10276 462 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 TCF4P15884 667 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 MAGEA9P43362 315 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 RPS9P46781 194 aaKnown RBP20.65■□□□□ 0.9
TOP3A-213ENST00000582230 IRAK1P51617 712 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 FZD5Q13467 585 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 SLC12A1Q13621 1099 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 RWDD4Q6NW29 188 aaKnown RBP20.65■□□□□ 0.9
TOP3A-213ENST00000582230 POLNQ7Z5Q5 900 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 ANKS1BQ7Z6G8 1248 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 CIR1Q86X95 450 aaPredicted RBP20.65■□□□□ 0.9
TOP3A-213ENST00000582230 TPCN2Q8NHX9 752 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 WFIKKN2Q8TEU8 576 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 GPATCH2LQ9NWQ4 482 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 MPP6Q9NZW5 540 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 KIAA1522Q9P206 1035 aaPredicted RBP20.65■□□□□ 0.9
TOP3A-213ENST00000582230 TBC1D30Q9Y2I9 924 aa20.65■□□□□ 0.9
TOP3A-213ENST00000582230 K7EQS6 105 aa20.64■□□□□ 0.89
TOP3A-213ENST00000582230 TIMM44O43615 452 aa20.64■□□□□ 0.89
TOP3A-213ENST00000582230 BUB1O43683 1085 aa20.64■□□□□ 0.89
TOP3A-213ENST00000582230 KRT86O43790 486 aa20.64■□□□□ 0.89
TOP3A-213ENST00000582230 CNTN5O94779 1100 aa20.64■□□□□ 0.89
TOP3A-213ENST00000582230 PABPC1P11940 636 aaKnown RBP20.64■□□□□ 0.89
TOP3A-213ENST00000582230 RHOQP17081 205 aa20.64■□□□□ 0.89
TOP3A-213ENST00000582230 EPHB2P29323 1055 aa20.64■□□□□ 0.89
TOP3A-213ENST00000582230 HLA-FP30511 346 aa20.64■□□□□ 0.89
TOP3A-213ENST00000582230 HOXC13P31276 330 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms