RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 MAPK15Q8TD08 544 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 OVCA2Q8WZ82 227 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 JAKMIP2Q96AA8 810 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 MYEOVQ96EZ4 313 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 SERAC1Q96JX3 654 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 CEP295NLQ96MC4 621 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 NOX5Q96PH1 765 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 CBWD1Q9BRT8 395 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 SDCBP2Q9H190 292 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 PABPC3Q9H361 631 aaKnown RBP4.33□□□□□ -1.72
CTC1-209ENST00000581729 SMYD3Q9H7B4 428 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 SGK2Q9HBY8 427 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 BRMS1Q9HCU9 246 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 CYLDQ9NQC7 956 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 ZNF71Q9NQZ8 489 aaPredicted RBP4.33□□□□□ -1.72
CTC1-209ENST00000581729 KRT82Q9NSB4 513 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 BLOC1S4Q9NUP1 217 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 GEMIN8Q9NWZ8 242 aaKnown RBP4.33□□□□□ -1.72
CTC1-209ENST00000581729 HMGXB4Q9UGU5 601 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 SEPT3Q9UH03 358 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 AGO1Q9UL18 857 aaKnown RBP4.33□□□□□ -1.72
CTC1-209ENST00000581729 DAAM1Q9Y4D1 1078 aa4.33□□□□□ -1.72
CTC1-209ENST00000581729 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.33□□□□□ -1.72
CTC1-209ENST00000581729 NIPBLQ6KC79 2804 aaeCLIP4.33□□□□□ -1.72
CTC1-209ENST00000581729 RP1L1Q8IWN7 2480 aaPredicted RBP4.33□□□□□ -1.72
CTC1-209ENST00000581729 SPG11Q96JI7 2443 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 NAV3Q8IVL0 2385 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 MED13Q9UHV7 2174 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 HHLA1C9JL84 531 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 RNF103O00237 685 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 YKT6O15498 198 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 LATO43561 262 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 RNASEH2AO75792 299 aaKnown RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 CDKL5O76039 1030 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 PRF1P14222 555 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 VAV1P15498 845 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 ITIH1P19827 911 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 NR1D1P20393 614 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 PSMA5P28066 241 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 RBMS1P29558 406 aaKnown RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 SLC5A2P31639 672 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 CD70P32970 193 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 DRD3P35462 400 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 GNL1P36915 607 aaPredicted RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 ETV5P41161 510 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 CASRP41180 1078 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 CTSOP43234 321 aaPredicted RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 AFMP43652 599 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 PSMD8P48556 350 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 DUSP3P51452 185 aaPredicted RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 ZNF132P52740 706 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 MLLT10P55197 1068 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 RBP5P82980 135 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 MCM6Q14566 821 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 NCAPHQ15003 741 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 CDKN3Q16667 212 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 TSR1Q2NL82 804 aaKnown RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 TPRG1LQ5T0D9 272 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 KRT79Q5XKE5 535 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 ZNF776Q68DI1 518 aaPredicted RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 NAPEPLDQ6IQ20 393 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 CHST9Q7L1S5 443 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 EFL1Q7Z2Z2 1120 aaKnown RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 GPBP1Q86WP2 473 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 ZFAND4Q86XD8 727 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 TICAM1Q8IUC6 712 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 MMAAQ8IVH4 418 aaKnown RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 FUKQ8N0W3 1084 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 B3GALNT2Q8NCR0 500 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 PDZD8Q8NEN9 1154 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 OR6B3Q8NGW1 331 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 GANCQ8TET4 914 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 JPH3Q8WXH2 748 aaPredicted RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 POMGNT1Q8WZA1 660 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 GTF3C6Q969F1 213 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 PMEPA1Q969W9 287 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 HPDLQ96IR7 371 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 MRGPRX3Q96LB0 322 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 TIPINQ9BVW5 301 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 STRA6Q9BX79 667 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 ELOVL4Q9GZR5 314 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 NACA2Q9H009 215 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 RSPH9Q9H1X1 276 aaPredicted RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 ZHX3Q9H4I2 956 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 PCIF1Q9H4Z3 704 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 ERVMER34-1Q9H9K5 563 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 FZD3Q9NPG1 666 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 PDRG1Q9NUG6 133 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 ABCB8Q9NUT2 735 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.32□□□□□ -1.72
CTC1-209ENST00000581729 FBXL12Q9NXK8 326 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 RBAKQ9NYW8 714 aaPredicted RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 FOXJ2Q9P0K8 574 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 LARSQ9P2J5 1176 aaKnown RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 KLF15Q9UIH9 416 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 ITGA11Q9UKX5 1188 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 FCF1Q9Y324 198 aaKnown RBP4.32□□□□□ -1.72
CTC1-209ENST00000581729 PCDHGA8Q9Y5G5 932 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 CYP46A1Q9Y6A2 500 aa4.32□□□□□ -1.72
CTC1-209ENST00000581729 DOCK9Q9BZ29 2069 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms