RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PRMT1Q99873 361 aaKnown RBP20.17■□□□□ 0.82
SREBF1-220ENST00000581707 MKRN2Q9H000 416 aaKnown RBP20.17■□□□□ 0.82
SREBF1-220ENST00000581707 TMEM245Q9H330 911 aa20.17■□□□□ 0.82
SREBF1-220ENST00000581707 STAP1Q9ULZ2 295 aa20.17■□□□□ 0.82
SREBF1-220ENST00000581707 H0Y626 953 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 GOLGA8SH3BPF8 625 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 AP5Z1O43299 807 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 PTGER3P43115 390 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 ATXN1P54253 815 aaKnown RBP20.16■□□□□ 0.82
SREBF1-220ENST00000581707 FMO1Q01740 532 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 PTPRNQ16849 979 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 FSCBQ5H9T9 825 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 ARMCX6Q7L4S7 300 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 ERMP1Q7Z2K6 904 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 DGLUCYQ7Z3D6 616 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 METTL3Q86U44 580 aaKnown RBP20.16■□□□□ 0.82
SREBF1-220ENST00000581707 PIGKQ92643 395 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 TTC17Q96AE7 1141 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 PIGVQ9NUD9 493 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 KIAA1522Q9P206 1035 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-220ENST00000581707 LAMA1P25391 3075 aa20.16■□□□□ 0.82
SREBF1-220ENST00000581707 F9P00740 461 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 CYP1A1P04798 512 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-220ENST00000581707 TFE3P19532 575 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-220ENST00000581707 CSKP41240 450 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 SULT1E1P49888 294 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 ZNF165P49910 485 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 COPAP53621 1224 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 CAMK2GQ13555 558 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-220ENST00000581707 RABGAP1LQ5R372 815 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 TTC39BQ5VTQ0 682 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-220ENST00000581707 OTUD1Q5VV17 481 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-220ENST00000581707 TCEAL6Q6IPX3 200 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 TRIM72Q6ZMU5 477 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 MMS22LQ6ZRQ5 1243 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 SND1Q7KZF4 910 aaKnown RBP eCLIP20.15■□□□□ 0.826e-14■■□□□ 12.6
SREBF1-220ENST00000581707 DEFB119Q8N690 84 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 PRCCQ92733 491 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-220ENST00000581707 TCEAL3Q969E4 200 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 NT5C3BQ969T7 300 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 SIPA1Q96FS4 1042 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 RTKNQ9BST9 563 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 WDCPQ9H6R7 721 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 CD93Q9NPY3 652 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 ITM2CQ9NQX7 267 aa20.15■□□□□ 0.82
SREBF1-220ENST00000581707 INTS6Q9UL03 887 aaKnown RBP20.15■□□□□ 0.82
SREBF1-220ENST00000581707 TNRC6BQ9UPQ9 1833 aaKnown RBP20.15■□□□□ 0.82
SREBF1-220ENST00000581707 MUC22E2RYF6 1773 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-220ENST00000581707 SLC30A4O14863 429 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 MOCS3O95396 460 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 ASLP04424 464 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 CXCR3P49682 368 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 AUHQ13825 339 aaKnown RBP20.14■□□□□ 0.81
SREBF1-220ENST00000581707 SLC25A52Q3SY17 297 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 PITRM1Q5JRX3 1037 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 BRMS1LQ5PSV4 323 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 LYSMD4Q5XG99 296 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 FBXL22Q6P050 247 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 ZNF366Q8N895 744 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 PGAP3Q96FM1 320 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-220ENST00000581707 ADAM33Q9BZ11 813 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 RXFP3Q9NSD7 469 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 TMEM51Q9NW97 253 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 SUN2Q9UH99 717 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 TMEM59LQ9UK28 342 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 HS3ST4Q9Y661 456 aa20.14■□□□□ 0.81
SREBF1-220ENST00000581707 KHNYNO15037 678 aaKnown RBP20.13■□□□□ 0.81
SREBF1-220ENST00000581707 TEX33O43247 280 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 NDUFS2O75306 463 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 PAGE1O75459 146 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 MMP8P22894 467 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 FLT3P36888 993 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 PI4KAP42356 2102 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 ST8SIA6P61647 398 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 DEUP1Q05D60 604 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 KLHL40Q2TBA0 621 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 ARCQ7LC44 396 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 CIR1Q86X95 450 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-220ENST00000581707 SYT12Q8IV01 421 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 CCAR2Q8N163 923 aaKnown RBP20.13■□□□□ 0.81
SREBF1-220ENST00000581707 OR2T3Q8NH03 318 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 SLC30A5Q8TAD4 765 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 RPRD1AQ96P16 312 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-220ENST00000581707 TBCBQ99426 244 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 FUCA2Q9BTY2 467 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 SIK2Q9H0K1 926 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 RTN4Q9NQC3 1192 aaKnown RBP20.13■□□□□ 0.81
SREBF1-220ENST00000581707 ARHGEF38Q9NXL2 777 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 USP36Q9P275 1121 aaKnown RBP20.13■□□□□ 0.81
SREBF1-220ENST00000581707 VANGL2Q9ULK5 521 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 PAXBP1Q9Y5B6 917 aa20.13■□□□□ 0.81
SREBF1-220ENST00000581707 A0A1B0GVM2 712 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 TCAF2A6NFQ2 919 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 ADCY5O95622 1261 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 ACADMP11310 421 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 ITPKAP23677 461 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 CD6P30203 668 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 DPP6P42658 865 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 TPMTP51580 245 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 LIMK1P53667 647 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms