RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CASQ1P31415 396 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 SLC6A4P31645 630 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 ETFBP38117 255 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 SEMA3BQ13214 749 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 E2F5Q15329 346 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 ATP13A4Q4VNC1 1196 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 TFDP3Q5H9I0 405 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 SEL1L2Q5TEA6 688 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 TXNRD3NBQ6F5E7 133 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 RFX8Q6ZV50 586 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 BZW1Q7L1Q6 419 aaKnown RBP14.72□□□□□ -0.05
SKA2-205ENST00000580541 TMEM25Q86YD3 366 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 PYROXD2Q8N2H3 581 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 RSAD2Q8WXG1 361 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 PBKQ96KB5 322 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 KCTD15Q96SI1 283 aaPredicted RBP14.72□□□□□ -0.05
SKA2-205ENST00000580541 NAPGQ99747 312 aaPredicted RBP14.72□□□□□ -0.05
SKA2-205ENST00000580541 CARD9Q9H257 536 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 SLC2A4RGQ9NR83 387 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 TMPRSS4Q9NRS4 437 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
SKA2-205ENST00000580541 CWC15Q9P013 229 aaKnown RBP14.72□□□□□ -0.05
SKA2-205ENST00000580541 SORCS3Q9UPU3 1222 aa14.72□□□□□ -0.05
SKA2-205ENST00000580541 WASH4PA8MWX3 477 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 NEDD8-MDP1E9PL57 170 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 I6L893 689 aaPredicted RBP14.71□□□□□ -0.05
SKA2-205ENST00000580541 KCNK3O14649 394 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 TRDMT1O14717 391 aaKnown RBP14.71□□□□□ -0.05
SKA2-205ENST00000580541 SCAMP3O14828 347 aaKnown RBP14.71□□□□□ -0.05
SKA2-205ENST00000580541 TJP3O95049 919 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 PENKP01210 267 aaPredicted RBP14.71□□□□□ -0.05
SKA2-205ENST00000580541 TYRP14679 529 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 PRLRP16471 622 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 TCP1P17987 556 aaKnown RBP14.71□□□□□ -0.05
SKA2-205ENST00000580541 OR1E1P30953 314 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 HOXC13P31276 330 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 SERPINB6P35237 376 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 MAPKAPK2P49137 400 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 ARSEP51690 589 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 SLC12A1Q13621 1099 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 CDH18Q13634 790 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 DPYSL3Q14195 570 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 PPP2R5EQ16537 467 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 CA9Q16790 459 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 ANKRD20A8PQ5CZ79 823 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 TJAP1Q5JTD0 557 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 C6orf118Q5T5N4 469 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 MANEALQ5VSG8 457 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 TRIM68Q6AZZ1 485 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 ZNF783Q6ZMS7 281 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 C14orf80Q86SX3 495 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 SETD3Q86TU7 594 aaPredicted RBP14.71□□□□□ -0.05
SKA2-205ENST00000580541 CPNE8Q86YQ8 564 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 SUGP1Q8IWZ8 645 aaKnown RBP14.71□□□□□ -0.05
SKA2-205ENST00000580541 UBALD2Q8IYN6 164 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 RIN3Q8TB24 985 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 MAIP1Q8WWC4 291 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 RAPGEF5Q92565 580 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 KRT35Q92764 455 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 RNF25Q96BH1 459 aaPredicted RBP14.71□□□□□ -0.05
SKA2-205ENST00000580541 ZFYVE19Q96K21 471 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 CSPG4P5Q96PW8 444 aa14.71□□□□□ -0.05
SKA2-205ENST00000580541 NAP1L3Q99457 506 aaPredicted RBP14.71□□□□□ -0.05
SKA2-205ENST00000580541 KIAA1522Q9P206 1035 aaPredicted RBP14.71□□□□□ -0.05
SKA2-205ENST00000580541 FAM72CH0Y354 149 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 GFRA2O00451 464 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 CES2O00748 559 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 DDX3YO15523 660 aaKnown RBP14.7□□□□□ -0.06
SKA2-205ENST00000580541 SLC34A2O95436 690 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 CYP17A1P05093 508 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 ASGR2P07307 311 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 ARSAP15289 507 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 GOT1P17174 413 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 EIF2DP41214 584 aaKnown RBP14.7□□□□□ -0.06
SKA2-205ENST00000580541 RPS24P62847 133 aaKnown RBP14.7□□□□□ -0.06
SKA2-205ENST00000580541 FAM72AQ5TYM5 149 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 FAM72DQ6L9T8 149 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 TMCO3Q6UWJ1 677 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 SPOCD1Q6ZMY3 1216 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 RALGPS2Q86X27 583 aaPredicted RBP14.7□□□□□ -0.06
SKA2-205ENST00000580541 FAM72BQ86X60 149 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 LRRC49Q8IUZ0 686 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 MFN1Q8IWA4 741 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.7□□□□□ -0.06
SKA2-205ENST00000580541 ZNF683Q8IZ20 524 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 GJD3Q8N144 294 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 CFAP52Q8N1V2 620 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 C17orf53Q8N3J3 647 aaPredicted RBP14.7□□□□□ -0.06
SKA2-205ENST00000580541 CARNMT1Q8N4J0 409 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 RTL3Q8N8U3 475 aaKnown RBP14.7□□□□□ -0.06
SKA2-205ENST00000580541 ST13P5Q8NFI4 369 aaPredicted RBP14.7□□□□□ -0.06
SKA2-205ENST00000580541 FIBINQ8TAL6 211 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 IGSF8Q969P0 613 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 RNF157Q96PX1 679 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 TLR10Q9BXR5 811 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 TMEM248Q9NWD8 314 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 DEC1Q9P2X7 70 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 DNAI1Q9UI46 699 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 PACSIN2Q9UNF0 486 aaPredicted RBP14.7□□□□□ -0.06
SKA2-205ENST00000580541 SNX10Q9Y5X0 201 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms