RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 IRAK1P51617 712 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 TPI1P60174 286 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 ETF1P62495 437 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 RPS24P62847 133 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 TNK2Q07912 1038 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 MMRN1Q13201 1228 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 RUNX3Q13761 415 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 DHCR24Q15392 516 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 ODF2Q5BJF6 829 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 TTC39BQ5VTQ0 682 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 DCAF12L1Q5VU92 463 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 FYB2Q5VWT5 728 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 VSIG1Q86XK7 387 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 RCOR2Q8IZ40 523 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 HJURPQ8NCD3 748 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 RBM41Q96IZ5 413 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 CSPG4P5Q96PW8 444 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 ZNF670Q9BS34 389 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 CALN1Q9BXU9 219 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 ZYG11BQ9C0D3 744 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 BRD9Q9H8M2 597 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 KIAA1549LQ6ZVL6 1849 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 TYW5A2RUC4 315 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 OTOL1A6NHN0 477 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 ZNF487B1APH4 448 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 FANCGO15287 622 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 TBL1XO60907 577 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 CYBBP04839 570 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 PYGMP11217 842 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 EPHB2P29323 1055 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 TDGQ13569 410 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 TAZQ16635 292 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 ALFQ53S48 1182 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 MPP7Q5T2T1 576 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 RWDD4Q6NW29 188 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 MFSD7Q6UXD7 560 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 RFX8Q6ZV50 586 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 ANKS1BQ7Z6G8 1248 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 CPA6Q8N4T0 437 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 DDI1Q8WTU0 396 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 FAF2Q96CS3 445 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 C16orf45Q96MC5 204 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 ECT2Q9H8V3 914 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 TRPV5Q9NQA5 729 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 GTSE1Q9NYZ3 720 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 MPP6Q9NZW5 540 aa16.39■□□□□ 0.21
CSNK1D-212ENST00000580061 CHD5Q8TDI0 1954 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 A0A1B0GVM2 712 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 TCAF2A6NFQ2 919 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 KCNK3O14649 394 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 HOXC11O43248 304 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 CNTN5O94779 1100 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 ADH1CP00326 375 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 PENKP01210 267 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 ADH5P11766 374 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 RHOQP17081 205 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 HOXD9P28356 352 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 CDKN2BP42772 138 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 COPS2P61201 443 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 GAD2Q05329 585 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 ZNF211Q13398 564 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 DPYSQ14117 519 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 ANO4Q32M45 955 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 ANKRD20A8PQ5CZ79 823 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 RNF43Q68DV7 783 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 SYT10Q6XYQ8 523 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 SPOCD1Q6ZMY3 1216 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 CHST9Q7L1S5 443 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 CIR1Q86X95 450 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 CCDC50Q8IVM0 306 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 BHMTQ93088 406 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 RNF157Q96PX1 679 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 NAPGQ99747 312 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 BBS2Q9BXC9 721 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 CARD9Q9H257 536 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 RETREG1Q9H6L5 497 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 CATSPERBQ9H7T0 1116 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 ARHGEF4Q9NR80 690 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 PLK2Q9NYY3 685 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 STIM2Q9P246 746 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 ZNF212Q9UDV6 495 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 DNAI1Q9UI46 699 aa16.38■□□□□ 0.21
CSNK1D-212ENST00000580061 NUP205Q92621 2012 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 CTAGE9A4FU28 777 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 WASH4PA8MWX3 477 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 NEDD8-MDP1E9PL57 170 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 FGF10O15520 208 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 DAPK3O43293 454 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 NARSO43776 548 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 CLDN11O75508 207 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 TYRP14679 529 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 ERCC2P18074 760 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 AMPD1P23109 780 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 CDH4P55283 916 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 NR1H3Q13133 447 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 PPP2R5EQ16537 467 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 GAB4Q2WGN9 574 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 ITPRIPL2Q3MIP1 535 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 TFDP3Q5H9I0 405 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 AADACL2Q6P093 401 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms