RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 CATSPERBQ9H7T0 1116 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 MPP6Q9NZW5 540 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 SAE1Q9UBE0 346 aaPredicted RBP14.3□□□□□ -0.12
TSEN54-206ENST00000579449 PPARGC1AQ9UBK2 798 aaKnown RBP14.3□□□□□ -0.12
TSEN54-206ENST00000579449 STOML2Q9UJZ1 356 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 ZNF510Q9Y2H8 683 aa14.3□□□□□ -0.12
TSEN54-206ENST00000579449 MYOFQ9NZM1 2061 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 E2F8A0AVK6 867 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 DRGXA6NNA5 263 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 FGF10O15520 208 aaPredicted RBP14.29□□□□□ -0.12
TSEN54-206ENST00000579449 PHF2O75151 1096 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 TCF3P15923 654 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 OTUD4Q01804 1114 aaKnown RBP14.29□□□□□ -0.12
TSEN54-206ENST00000579449 SNX1Q13596 522 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 PAFAH1B3Q15102 231 aaKnown RBP14.29□□□□□ -0.12
TSEN54-206ENST00000579449 CCDC85BQ15834 202 aaPredicted RBP14.29□□□□□ -0.12
TSEN54-206ENST00000579449 ZNF77Q15935 545 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 CCNG2Q16589 344 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 C5orf22Q49AR2 442 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 TMCO3Q6UWJ1 677 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 BBS7Q8IWZ6 715 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 KLHL7Q8IXQ5 586 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 C12orf50Q8NA57 414 aaPredicted RBP14.29□□□□□ -0.12
TSEN54-206ENST00000579449 ACTL9Q8TC94 416 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 ASB16Q96NS5 453 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 RPRD1AQ96P16 312 aaPredicted RBP14.29□□□□□ -0.12
TSEN54-206ENST00000579449 KRT12Q99456 494 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 ZYG11BQ9C0D3 744 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 DDX47Q9H0S4 455 aaKnown RBP14.29□□□□□ -0.12
TSEN54-206ENST00000579449 GDE1Q9NZC3 331 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 CDH7Q9ULB5 785 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 HEY1Q9Y5J3 304 aa14.29□□□□□ -0.12
TSEN54-206ENST00000579449 WASH4PA8MWX3 477 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 MFSD11O43934 449 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 TSPAN3O60637 253 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 CNTN5O94779 1100 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 RHOQP17081 205 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 COILP38432 576 aaPredicted RBP14.28□□□□□ -0.12
TSEN54-206ENST00000579449 SGSHP51688 502 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 GBE1Q04446 702 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 SLC10A2Q12908 348 aaPredicted RBP14.28□□□□□ -0.12
TSEN54-206ENST00000579449 NOMO1Q15155 1222 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 ALFQ53S48 1182 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 FAM78AQ5JUQ0 283 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 HABP4Q5JVS0 413 aaKnown RBP14.28□□□□□ -0.12
TSEN54-206ENST00000579449 RABGAP1LQ5R372 815 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 NLRP14Q86W24 1093 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 CIR1Q86X95 450 aaPredicted RBP14.28□□□□□ -0.12
TSEN54-206ENST00000579449 FAM217AQ8IXS0 508 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 MMGT1Q8N4V1 131 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 CELF5Q8N6W0 485 aaKnown RBP14.28□□□□□ -0.12
TSEN54-206ENST00000579449 RTL3Q8N8U3 475 aaKnown RBP14.28□□□□□ -0.12
TSEN54-206ENST00000579449 NOA1Q8NC60 698 aaKnown RBP14.28□□□□□ -0.12
TSEN54-206ENST00000579449 SMRP1Q8NCR6 262 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 P3H4Q92791 437 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 PRICKLE1Q96MT3 831 aaPredicted RBP14.28□□□□□ -0.12
TSEN54-206ENST00000579449 MYADMQ96S97 322 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 POMKQ9H5K3 350 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 LRRC19Q9H756 370 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 KIF9Q9HAQ2 790 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 HOMER3Q9NSC5 361 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 CD207Q9UJ71 328 aa14.28□□□□□ -0.12
TSEN54-206ENST00000579449 SHROOM3Q8TF72 1996 aa14.27□□□□□ -0.12
TSEN54-206ENST00000579449 GFRA2O00451 464 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 LIASO43766 372 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 MAP3K6O95382 1288 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 KCNJ1P48048 391 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 NR2C2P49116 596 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 VCPP55072 806 aaKnown RBP14.27□□□□□ -0.13
TSEN54-206ENST00000579449 EIF3EP60228 445 aaKnown RBP14.27□□□□□ -0.13
TSEN54-206ENST00000579449 RPS24P62847 133 aaKnown RBP14.27□□□□□ -0.13
TSEN54-206ENST00000579449 TTC27Q6P3X3 843 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 CCDC137Q6PK04 289 aaKnown RBP14.27□□□□□ -0.13
TSEN54-206ENST00000579449 CFAP52Q8N1V2 620 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 CPXM2Q8N436 756 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 DEFB123Q8N688 67 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 NPWQ8N729 165 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 NETO2Q8NC67 525 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 SMARCD2Q92925 531 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 RSPRY1Q96DX4 576 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 GUCD1Q96NT3 240 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 FRMD8P1Q9BZ68 369 aaPredicted RBP14.27□□□□□ -0.13
TSEN54-206ENST00000579449 KLC2Q9H0B6 622 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 NDFIP2Q9NV92 336 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 TMEM248Q9NWD8 314 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 DTLQ9NZJ0 730 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 DNPEPQ9ULA0 475 aa14.27□□□□□ -0.13
TSEN54-206ENST00000579449 ZFP37Q9Y6Q3 630 aaPredicted RBP14.27□□□□□ -0.13
TSEN54-206ENST00000579449 CHD5Q8TDI0 1954 aa14.26□□□□□ -0.13
TSEN54-206ENST00000579449 EFCAB8A8MWE9 144 aa14.26□□□□□ -0.13
TSEN54-206ENST00000579449 H3BQ06 376 aaPredicted RBP14.26□□□□□ -0.13
TSEN54-206ENST00000579449 H7C0C1 242 aa14.26□□□□□ -0.13
TSEN54-206ENST00000579449 MCF2LO15068 1137 aa14.26□□□□□ -0.13
TSEN54-206ENST00000579449 TBL1XO60907 577 aa14.26□□□□□ -0.13
TSEN54-206ENST00000579449 FOSL2P15408 326 aa14.26□□□□□ -0.13
TSEN54-206ENST00000579449 CHRNA3P32297 505 aa14.26□□□□□ -0.13
TSEN54-206ENST00000579449 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
TSEN54-206ENST00000579449 SERPINB6P35237 376 aa14.26□□□□□ -0.13
TSEN54-206ENST00000579449 CHKAP35790 457 aa14.26□□□□□ -0.13
TSEN54-206ENST00000579449 VIPR2P41587 438 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms