RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 FUCA2Q9BTY2 467 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 EDEM3Q9BZQ6 932 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 MUC3BQ9H195 1237 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 ARRDC1-AS1Q9H2J1 176 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 HAUS4Q9H6D7 363 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 PRDM16Q9HAZ2 1276 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 PIGVQ9NUD9 493 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 THAP10Q9P2Z0 257 aaPredicted RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 SUN2Q9UH99 717 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 VPS28Q9UK41 221 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 BZW2Q9Y6E2 419 aaKnown RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 CFAP54Q96N23 3096 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 SDK1Q7Z5N4 2213 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 A0A1W2PQF6 199 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 AP5Z1O43299 807 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 FOXD2O60548 495 aaPredicted RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 CLDN11O75508 207 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 GJB6O95452 261 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 IGLV3-25P01717 112 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 FTLP02792 175 aaPredicted RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 ASLP04424 464 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 SKILP12757 684 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 UNGP13051 313 aaPredicted RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 HLA-EP13747 358 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 GABRG2P18507 467 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 TFE3P19532 575 aaPredicted RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 GPD1P21695 349 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 RDXP35241 583 aaKnown RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 RFC1P35251 1148 aaPredicted RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 FLT3P36888 993 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 GGCXP38435 758 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 CSKP41240 450 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 IL12RB1P42701 662 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 NUMBP49757 651 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 ECT2LQ008S8 904 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 RPL6Q02878 288 aaKnown RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 C1QBPQ07021 282 aaKnown RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 SFSWAPQ12872 951 aaKnown RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 LMAN2Q12907 356 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 CCDC6Q16204 474 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 FUT11Q495W5 492 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 PLK5Q496M5 336 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 FSCBQ5H9T9 825 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 PITRM1Q5JRX3 1037 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 KIAA1211LQ6NV74 962 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 SLC36A4Q6YBV0 504 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 ARMCX6Q7L4S7 300 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 ARCQ7LC44 396 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 ADIPOR2Q86V24 386 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 FAM124AQ86V42 546 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 RASSF3Q86WH2 238 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 CIR1Q86X95 450 aaPredicted RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 CACUL1Q86Y37 369 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 PHF13Q86YI8 300 aaPredicted RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 TMPRSS6Q8IU80 811 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 TMEFF1Q8IYR6 380 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 DEFB119Q8N690 84 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 PIGKQ92643 395 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 IQCDQ96DY2 449 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 SIPA1Q96FS4 1042 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 P2RY11Q96G91 374 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 LOXL4Q96JB6 756 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 ZC3H10Q96K80 434 aaKnown RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 C1orf74Q96LT6 269 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 PRICKLE1Q96MT3 831 aaPredicted RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 GABRG3Q99928 467 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 SPON2Q9BUD6 331 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 PARVAQ9NVD7 372 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 ZNHIT6Q9NWK9 470 aaKnown RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 AIPL1Q9NZN9 384 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 CALCOCO1Q9P1Z2 691 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 OR12D3Q9UGF7 316 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 TMEM59LQ9UK28 342 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 CYP8B1Q9UNU6 501 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 NCKAP1Q9Y2A7 1128 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 HS3ST4Q9Y661 456 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 NUP210Q8TEM1 1887 aaPredicted RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 MYH10P35580 1976 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF638Q14966 1978 aaKnown RBP6.76□□□□□ -1.33
TRAF4-213ENST00000578917 PTPRDP23468 1912 aa6.76□□□□□ -1.33
TRAF4-213ENST00000578917 A0A1B0GVM2 712 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 TCAF2A6NFQ2 919 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SIGLEC16A6NMB1 481 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 BNIP3LO60238 219 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 RTN2O75298 545 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 RNF8O76064 485 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 DNTTP04053 509 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SERPING1P05155 500 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 RHOCP08134 193 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 NDUFV2P19404 249 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 SDHBP21912 280 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 RRM1P23921 792 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 PRKCHP24723 683 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 OXTRP30559 389 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 OR1E1P30953 314 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 ADRA1BP35368 520 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 P2RY2P41231 377 aa6.75□□□□□ -1.33
TRAF4-213ENST00000578917 ATXN1P54253 815 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms