RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SPARCL1Q14515 664 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 MTFR1Q15390 333 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 TRIP4Q15650 581 aaPredicted RBP11.43□□□□□ -0.58
SKA2-204ENST00000578519 TAF12Q16514 161 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 KCTD19Q17RG1 926 aaPredicted RBP11.43□□□□□ -0.58
SKA2-204ENST00000578519 TEX44Q53QW1 395 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 GKAP1Q5VSY0 366 aaPredicted RBP11.43□□□□□ -0.58
SKA2-204ENST00000578519 ARMC3Q5W041 872 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 TTC19Q6DKK2 380 aaPredicted RBP11.43□□□□□ -0.58
SKA2-204ENST00000578519 TRABD2AQ86V40 505 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 SLC26A11Q86WA9 606 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 LRRC6Q86X45 466 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 SRRM1Q8IYB3 904 aaKnown RBP11.43□□□□□ -0.58
SKA2-204ENST00000578519 TAB3Q8N5C8 712 aaPredicted RBP11.43□□□□□ -0.58
SKA2-204ENST00000578519 STKLD1Q8NE28 680 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 GABPB2Q8TAK5 448 aaPredicted RBP11.43□□□□□ -0.58
SKA2-204ENST00000578519 GSDMBQ8TAX9 411 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 MAML1Q92585 1016 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 GRAMD1AQ96CP6 724 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 BTN2A3PQ96KV6 586 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 CRISPLD2Q9H0B8 497 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 SIK2Q9H0K1 926 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 TRABDQ9H4I3 376 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 TMEM30AQ9NV96 361 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 TBK1Q9UHD2 729 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 RSPH14Q9UHP6 348 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 ZNF180Q9UJW8 692 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 SSX2IPQ9Y2D8 614 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 AAR2Q9Y312 384 aaKnown RBP11.43□□□□□ -0.58
SKA2-204ENST00000578519 MAD1L1Q9Y6D9 718 aa11.43□□□□□ -0.58
SKA2-204ENST00000578519 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 TCRBV7S3A2A0A539 114 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 MTMR11A4FU01 709 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 PAGE1O75459 146 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 ANXA9O76027 345 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 ZWINTO95229 277 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 METTL18O95568 372 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 LAG3P18627 525 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 SSTR1P30872 391 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 HOXC13P31276 330 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 MLLT6P55198 1093 aaPredicted RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 RING1Q06587 406 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 DNAJC3Q13217 504 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 EIF4EBP2Q13542 120 aaPredicted RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 FASTKD3Q14CZ7 662 aaKnown RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 DDR2Q16832 855 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 HP1BP3Q5SSJ5 553 aaPredicted RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 TTC39BQ5VTQ0 682 aaPredicted RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 HHATQ5VTY9 493 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 TPGS2Q68CL5 300 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 NAPEPLDQ6IQ20 393 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 CAPN12Q6ZSI9 719 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 DEFB128Q7Z7B8 93 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 SCD5Q86SK9 330 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 GPR65Q8IYL9 337 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 ATPAF2Q8N5M1 289 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 ZNF473Q8WTR7 871 aaKnown RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 ATXN2LQ8WWM7 1075 aaKnown RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 STAMBPL1Q96FJ0 436 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 CFAP36Q96G28 342 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 TMEM169Q96HH4 297 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 SCLYQ96I15 445 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 FCRL2Q96LA5 508 aaPredicted RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 ZNF558Q96NG5 402 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 PAFAH2Q99487 392 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 LGMNQ99538 433 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 SEPT5Q99719 369 aaPredicted RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 DDX50Q9BQ39 737 aaKnown RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 GPR62Q9BZJ7 368 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 PPP1R12CQ9BZL4 782 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 UBE2OQ9C0C9 1292 aaKnown RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 LRRC40Q9H9A6 602 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 PPARGC1AQ9UBK2 798 aaKnown RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 MTRRQ9UBK8 725 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 HBS1LQ9Y450 684 aaKnown RBP11.42□□□□□ -0.58
SKA2-204ENST00000578519 PCDHA11Q9Y5I1 949 aa11.42□□□□□ -0.58
SKA2-204ENST00000578519 ARHGAP42A6NI28 874 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 KCNU1A8MYU2 1149 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 TM9SF1O15321 606 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 TBC1D4O60343 1298 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 SUN1O94901 812 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 MAP3K6O95382 1288 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 POLBP06746 335 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 VIMP08670 466 aaKnown RBP11.41□□□□□ -0.58
SKA2-204ENST00000578519 SNRPAP09012 282 aaKnown RBP11.41□□□□□ -0.58
SKA2-204ENST00000578519 CLTBP09497 229 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 CSH1P0DML2 217 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 CSH2P0DML3 217 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 VAV1P15498 845 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 RHOQP17081 205 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 PGAM1P18669 254 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 PRKCHP24723 683 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 PTPN3P26045 913 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 ELF1P32519 619 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 ALDH1A3P47895 512 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 CCT5P48643 541 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 TUBP50607 506 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 NDST2P52849 883 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 RABGGTBP53611 331 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 GEMP55040 296 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms