RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 EPS8L3Q8TE67 593 aaKnown RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 SMG7Q92540 1137 aaKnown RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 GCNAQ96QF7 691 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 HAPLN3Q96S86 360 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 NAPGQ99747 312 aaPredicted RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 TUBB2BQ9BVA1 445 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 RNF38Q9H0F5 515 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 CARD9Q9H257 536 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 ATXN3LQ9H3M9 355 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 TASP1Q9H6P5 420 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 WDCPQ9H6R7 721 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 PIGVQ9NUD9 493 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 DDIT4Q9NX09 232 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 ARHGEF38Q9NXL2 777 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 DDX56Q9NY93 547 aaKnown RBP8.31□□□□□ -1.08
COPS3-215ENST00000578317 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.31□□□□□ -1.08
COPS3-215ENST00000578317 MARCH2Q9P0N8 246 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 CLEC1BQ9P126 229 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 DNAI1Q9UI46 699 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 SNX12Q9UMY4 172 aa8.31□□□□□ -1.08
COPS3-215ENST00000578317 COL4A4P53420 1690 aaPredicted RBP8.3□□□□□ -1.08
COPS3-215ENST00000578317 TMEM110-MUSTN1A8MSY1 372 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 ZNF487B1APH4 448 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 DDX3YO15523 660 aaKnown RBP8.3□□□□□ -1.08
COPS3-215ENST00000578317 LINC01565O15544 149 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 ZRANB2O95218 330 aaKnown RBP eCLIP8.3□□□□□ -1.08
COPS3-215ENST00000578317 TCP1P17987 556 aaKnown RBP8.3□□□□□ -1.08
COPS3-215ENST00000578317 HDCP19113 662 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 IL1R2P27930 398 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 LTBRP36941 435 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 ZNF135P52742 658 aaPredicted RBP8.3□□□□□ -1.08
COPS3-215ENST00000578317 RWDD2BP57060 319 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 TAS2R40P59535 323 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 PTSQ03393 145 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 TAZQ16635 292 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 CDO1Q16878 200 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 ARL13BQ3SXY8 428 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 ATAT1Q5SQI0 421 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 UNC45BQ8IWX7 931 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 KATNAL2Q8IYT4 538 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 RCOR2Q8IZ40 523 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 C12orf76Q8N812 135 aaPredicted RBP8.3□□□□□ -1.08
COPS3-215ENST00000578317 EXD1Q8NHP7 514 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 MSLNLQ96KJ4 702 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 C1orf74Q96LT6 269 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 SLC46A2Q9BY10 475 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 OSBPL2Q9H1P3 480 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 ACBD3Q9H3P7 528 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 FAM204AQ9H8W3 233 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 PIDD1Q9HB75 910 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 HCFC1R1Q9NWW0 138 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 RNF14Q9UBS8 474 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 FAM8A1Q9UBU6 413 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 SFMBT1Q9UHJ3 866 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 SLC12A6Q9UHW9 1150 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 HYOU1Q9Y4L1 999 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 SAR1BQ9Y6B6 198 aa8.3□□□□□ -1.08
COPS3-215ENST00000578317 PTPRDP23468 1912 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 A0A1W2PNR3 127 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 C2orf78A6NCI8 922 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ENC1O14682 589 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ATP1A1P05023 1023 aaKnown RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 RARAP10276 462 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 MYL4P12829 197 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 TCF4P15884 667 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ARSEP51690 589 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ATXN1P54253 815 aaKnown RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 MLLT6P55198 1093 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 TBX4P57082 545 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 NRG1Q02297 640 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 EFEMP1Q12805 493 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 NME3Q13232 169 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 PDK2Q15119 407 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 DPYSL2Q16555 572 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ARHGAP15Q53QZ3 475 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 NUGGCQ68CJ6 796 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 TXNDC8Q6A555 127 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 CES5AQ6NT32 575 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 SCYL2Q6P3W7 929 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 FAM131BQ86XD5 332 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 CPNE8Q86YQ8 564 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 MAP7D3Q8IWC1 876 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 CMTM8Q8IZV2 173 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 MICALL1Q8N3F8 863 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ALG3Q92685 438 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 KRT35Q92764 455 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 PBKQ96KB5 322 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 FCRL2Q96LA5 508 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 CDX2Q99626 313 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 PRDM16Q9HAZ2 1276 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 GDE1Q9NZC3 331 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 RCOR3Q9P2K3 495 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 PCSK1NQ9UHG2 260 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 STOML2Q9UJZ1 356 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 NUDT5Q9UKK9 219 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 TTC7AQ9ULT0 858 aaPredicted RBP8.29□□□□□ -1.08
COPS3-215ENST00000578317 FZD10Q9ULW2 581 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 ARHGAP26Q9UNA1 814 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 EFR3BQ9Y2G0 817 aa8.29□□□□□ -1.08
COPS3-215ENST00000578317 MRPS23Q9Y3D9 190 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms