RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 KAT8Q9H7Z6 458 aaKnown RBP4.52□□□□□ -1.69
CDH8-205ENST00000577730 SMPD3Q9NY59 655 aaPredicted RBP4.52□□□□□ -1.69
CDH8-205ENST00000577730 PNMA8BQ9ULN7 279 aaPredicted RBP4.52□□□□□ -1.69
CDH8-205ENST00000577730 PLCH2O75038 1416 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 FRMPD4Q14CM0 1322 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ZNF879B4DU55 563 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 MYL12BO14950 172 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 PRMT3O60678 531 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TSHRP16473 764 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 RASA1P20936 1047 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 PRDX6P30041 224 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TFDP1Q14186 410 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 NFE2Q16621 373 aaPredicted RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 FAXCQ5TGI0 409 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 OR52E8Q6IFG1 317 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 PYHIN1Q6K0P9 492 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TMEM270Q6UE05 265 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ZCCHC23Q6ZST2 131 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ZNF767PQ75MW2 155 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 AMIGO1Q86WK6 493 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 UXS1Q8NBZ7 420 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 AP3S1Q92572 193 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 MYLPFQ96A32 169 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ULK4Q96C45 1275 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 OTUB1Q96FW1 271 aaPredicted RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 ERMAPQ96PL5 475 aaPredicted RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 ADI1Q9BV57 179 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 RTFDC1Q9BY42 306 aaPredicted RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 GSDMCQ9BYG8 508 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TP63Q9H3D4 680 aaPredicted RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 SPAG4Q9NPE6 437 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 FAM105AQ9NUU6 356 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 IFT52Q9Y366 437 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 SNX8Q9Y5X2 465 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TEX51A0A1B0GUA7 166 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 UBA6A0AVT1 1052 aaPredicted RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 RGSL1A5PLK6 1076 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 METTL21EPA6NDL7 271 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ZNF99A8MXY4 864 aaPredicted RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 CDC40O60508 579 aaKnown RBP eCLIP4.51□□□□□ -1.69
CDH8-205ENST00000577730 PLOD3O60568 738 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 THRBP10828 461 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 GUCY1A2P33402 732 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ETFBP38117 255 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ETV1P50549 477 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 CDH6P55285 790 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 NIPAL4Q0D2K0 466 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ANKS6Q68DC2 871 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 SMG8Q8ND04 991 aaKnown RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 TMIEQ8NEW7 156 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 SDR42E1Q8WUS8 393 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 FAM149B1Q96BN6 582 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ISOC1Q96CN7 298 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ELMO2Q96JJ3 720 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 EYA3Q99504 573 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 CIB1Q99828 191 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 NOL11Q9H8H0 719 aaKnown RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 NDUFAF4Q9P032 175 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 SLC7A8Q9UHI5 535 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 PNPLA7Q6ZV29 1317 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 FADS2P1A8MWK0 482 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 CD3EAPO15446 510 aaKnown RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 RBP3P10745 1247 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 WARSP23381 471 aaKnown RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 SDC4P31431 198 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TAGLNQ01995 201 aaKnown RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 PLCL1Q15111 1095 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 SSX2Q16385 188 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 CDO1Q16878 200 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 WDR59Q6PJI9 974 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 C3orf67Q6ZVT6 689 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 FAM71DQ8N9W8 422 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.51□□□□□ -1.69
CDH8-205ENST00000577730 AGAP3Q96P47 875 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 FERD3LQ96RJ6 166 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TDRD1Q9BXT4 1180 aaKnown RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 RERGLQ9H628 205 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 LGALS13Q9UHV8 139 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 EMSYQ7Z589 1322 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 H0YJX3 145 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TOR1BO14657 336 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TIMM44O43615 452 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 SSX5O60225 188 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 KDM4BO94953 1096 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 SNAP29O95721 258 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 CFBP00751 764 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 APRTP07741 180 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 RARBP10826 455 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 NAT2P11245 290 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 ETV3P41162 512 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 KCNJ8Q15842 424 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 FNBP1LQ5T0N5 605 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 TIGD7Q6NT04 549 aaPredicted RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 RNF135Q8IUD6 432 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 FOXP4Q8IVH2 680 aaPredicted RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 ITFG1Q8TB96 612 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 RCN3Q96D15 328 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 CCDC126Q96EE4 140 aa4.51□□□□□ -1.69
CDH8-205ENST00000577730 PURBQ96QR8 312 aaKnown RBP4.51□□□□□ -1.69
CDH8-205ENST00000577730 INO80BQ9C086 356 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms