RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 EPN2O95208 641 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 CAVIN2O95810 425 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 IGLV3-19P01714 112 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 PABPC1P11940 636 aaKnown RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 FERP16591 822 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 CDK11BP21127 795 aaKnown RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 RRM1P23921 792 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 HNRNPH3P31942 346 aaKnown RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 CCR1P32246 355 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 CNR2P34972 360 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 RFC1P35251 1148 aaPredicted RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 CTSOP43234 321 aaPredicted RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 SLC11A2P49281 568 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 SULT1E1P49888 294 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 NRLP54845 237 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 RPL7AP62424 266 aaKnown RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 CDK17Q00537 523 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 ARID5AQ03989 594 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 C1QBPQ07021 282 aaKnown RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 SEMA3BQ13214 749 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 CAMK2GQ13555 558 aaPredicted RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 AUHQ13825 339 aaKnown RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 SKOR2Q2VWA4 1001 aaPredicted RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 PLEKHG6Q3KR16 790 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 PLK5Q496M5 336 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 BRMS1LQ5PSV4 323 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 PLA2G2CQ5R387 149 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 PEAR1Q5VY43 1037 aaPredicted RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 PMS2CLQ68D20 193 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 PLEKHA7Q6IQ23 1121 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 WDR59Q6PJI9 974 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 PHLDB2Q86SQ0 1253 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 CHSY1Q86X52 802 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 MCOLN2Q8IZK6 566 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 LGI2Q8N0V4 545 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 CCAR2Q8N163 923 aaKnown RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 CCDC185Q8N715 623 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 ANKRD20A12PQ8NF67 263 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 TSTD1Q8NFU3 115 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 CYB5D2Q8WUJ1 264 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 GOLGA1Q92805 767 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 MRGPRX1Q96LB2 322 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 PSMB7Q99436 277 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 EDEM3Q9BZQ6 932 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 HAUS4Q9H6D7 363 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.97□□□□□ -0.97
SMG6-216ENST00000575176 ELOVL2Q9NXB9 296 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 RRN3Q9NYV6 651 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 IFNKQ9P0W0 207 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 USP36Q9P275 1121 aaKnown RBP8.97□□□□□ -0.97
SMG6-216ENST00000575176 SLC8A2Q9UPR5 921 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 CEP83Q9Y592 693 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 CEP295Q9C0D2 2601 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 BPTFQ12830 3046 aa8.97□□□□□ -0.97
SMG6-216ENST00000575176 GON4LQ3T8J9 2241 aa8.96□□□□□ -0.97
SMG6-216ENST00000575176 SYNJ2BP-COX16A0A087WUM0 186 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 IGHV1OR15-9A0A0B4J2B8 117 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 A0A1B0GVM2 712 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 TCAF2A6NFQ2 919 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 DRGXA6NNA5 263 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 FAM72CH0Y354 149 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 CCP110O43303 1012 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 RPP40O75818 363 aaKnown RBP8.96□□□□□ -0.98
SMG6-216ENST00000575176 APOEP02649 317 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 TPM2P07951 284 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 HLA-EP13747 358 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 MZF1P28698 734 aaPredicted RBP8.96□□□□□ -0.98
SMG6-216ENST00000575176 RDXP35241 583 aaKnown RBP8.96□□□□□ -0.98
SMG6-216ENST00000575176 CSKP41240 450 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 PLK1P53350 603 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 NRG1Q02297 640 aaPredicted RBP8.96□□□□□ -0.98
SMG6-216ENST00000575176 SCAPQ12770 1279 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 NME3Q13232 169 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 LPAL2Q16609 132 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 ASTE1Q2TB18 679 aaPredicted RBP8.96□□□□□ -0.98
SMG6-216ENST00000575176 PITRM1Q5JRX3 1037 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 EOGTQ5NDL2 527 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 FAM72AQ5TYM5 149 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 MBLAC2Q68D91 279 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 LAIR1Q6GTX8 287 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 FAM72DQ6L9T8 149 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 CHST9Q7L1S5 443 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 STRADAQ7RTN6 431 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 NLRP14Q86W24 1093 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 FAM72BQ86X60 149 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 FAM131BQ86XD5 332 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 MFN1Q8IWA4 741 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 APCDD1Q8J025 514 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 AHI1Q8N157 1196 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 ZNF366Q8N895 744 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 WFIKKN2Q8TEU8 576 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 RXFP2Q8WXD0 754 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 ATRIPQ8WXE1 791 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 RLN3Q8WXF3 142 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 EXOC4Q96A65 974 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 FAM131CQ96AQ9 280 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 ERLEC1Q96DZ1 483 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 TMA16Q96EY4 203 aaKnown RBP8.96□□□□□ -0.98
SMG6-216ENST00000575176 PEBP4Q96S96 227 aa8.96□□□□□ -0.98
SMG6-216ENST00000575176 TKTL2Q9H0I9 626 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms