RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 PIN4Q9Y237 131 aaKnown RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 CLDN5O00501 218 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 NPR3P17342 541 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 PAX7P23759 505 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 NDUFV1P49821 464 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 SESN3P58005 492 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 LILRA4P59901 499 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 DEUP1Q05D60 604 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 KDSRQ06136 332 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 IFRD2Q12894 506 aaPredicted RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 RCN2Q14257 317 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 GRTP1Q5TC63 336 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 DPP9Q86TI2 863 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 RASSF3Q86WH2 238 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 WDR75Q8IWA0 830 aaKnown RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 CCNYQ8ND76 341 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 PPP1R13LQ8WUF5 828 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 TMEM40Q8WWA1 233 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 SCG3Q8WXD2 468 aaKnown RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 STMN2Q93045 179 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 ATP2A3Q93084 1043 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 WNT8BQ93098 351 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 ISL2Q96A47 359 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 PGBD4Q96DM1 585 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 FCRL3Q96P31 734 aaPredicted RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 TINF2Q9BSI4 451 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 ABHD16BQ9H3Z7 469 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 ZFATQ9P243 1243 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 BTBD19C9JJ37 291 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 M0QYT0 321 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 EEF2KO00418 725 aaKnown RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 CREB3O43889 395 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 ZNF189O75820 626 aaPredicted RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 F2P00734 622 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 POLBP06746 335 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 FAM163BP0C2L3 166 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 ERVK-10P10266 1014 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 ALOX15P16050 662 aaPredicted RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 PTPN1P18031 435 aaKnown RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 CPOXP36551 454 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 GP5P40197 560 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 MLH1P40692 756 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 FRG1Q14331 258 aaKnown RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 PPM1JQ5JR12 505 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 SYPL2Q5VXT5 272 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 MAVSQ7Z434 540 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 MYLK4Q86YV6 388 aaPredicted RBP9.18□□□□□ -0.94
NCBP3-204ENST00000574911 C10orf107Q8IVU9 208 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 TP53INP2Q8IXH6 220 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 ULK2Q8IYT8 1036 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 NME8Q8N427 588 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 RNF169Q8NCN4 708 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 OR6Y1Q8NGX8 325 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 DTX3LQ8TDB6 740 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 CERS2Q96G23 380 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 SORT1Q99523 831 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 CPNE1Q99829 537 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 PIGVQ9NUD9 493 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 DNAJC28Q9NX36 388 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 TMEM216Q9P0N5 145 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 ADAM28Q9UKQ2 775 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 STAP1Q9ULZ2 295 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 RAD54BQ9Y620 910 aa9.18□□□□□ -0.94
NCBP3-204ENST00000574911 SYNJ2BP-COX16A0A087WUM0 186 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 ZNF195O14628 629 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 KLHL2O95198 593 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 FYNP06241 537 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 GRK2P25098 689 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 PTPN3P26045 913 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 LRPAP1P30533 357 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 GARSP41250 739 aaKnown RBP9.17□□□□□ -0.94
NCBP3-204ENST00000574911 ADAM17P78536 824 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 PDE1BQ01064 536 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 SNX17Q15036 470 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 TRMT5Q32P41 509 aaKnown RBP9.17□□□□□ -0.94
NCBP3-204ENST00000574911 BSPRYQ5W0U4 402 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 CAPRIN2Q6IMN6 1127 aaKnown RBP9.17□□□□□ -0.94
NCBP3-204ENST00000574911 CES3Q6UWW8 571 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 RIPOR1Q6ZS17 1223 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 CLEC20AQ6ZU45 233 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 HFE2Q6ZVN8 426 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 ARRDC4Q8NCT1 418 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 SMG8Q8ND04 991 aaKnown RBP9.17□□□□□ -0.94
NCBP3-204ENST00000574911 MICAL1Q8TDZ2 1067 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 DNAJB3Q8WWF6 145 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 NTAN1Q96AB6 310 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 MS4A4AQ96JQ5 239 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 PANX3Q96QZ0 392 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 SLC9A7Q96T83 725 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 THTPAQ9BU02 230 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 LRRC4Q9HBW1 653 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 PNPOQ9NVS9 261 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 COX16Q9P0S2 106 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 COPG2Q9UBF2 871 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 TSC2P49815 1807 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 FAM72CH0Y354 149 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 GABRDO14764 452 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 CIB2O75838 187 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 AP2A1O95782 977 aa9.17□□□□□ -0.94
NCBP3-204ENST00000574911 C6orf222P0C671 652 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms