RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SEMA4AQ9H3S1 761 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 POLR3BQ9NW08 1133 aaPredicted RBP16.35■□□□□ 0.21
CHD3-215ENST00000572750 VANGL2Q9ULK5 521 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 PAXBP1Q9Y5B6 917 aa16.35■□□□□ 0.21
CHD3-215ENST00000572750 CEP295Q9C0D2 2601 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 SSU72P8A0A1W2PR75 194 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 PRRT4C9JH25 899 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 LAMTOR5O43504 91 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 ENDOD1O94919 500 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 MYBL1P10243 752 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 HLA-FP30511 346 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 TIE1P35590 1138 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 ZNF143P52747 638 aaPredicted RBP16.34■□□□□ 0.21
CHD3-215ENST00000572750 ZNF252P-AS1Q0IIN9 211 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
CHD3-215ENST00000572750 SLC18A3Q16572 532 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 ASTE1Q2TB18 679 aaPredicted RBP16.34■□□□□ 0.21
CHD3-215ENST00000572750 RNF43Q68DV7 783 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 STRADAQ7RTN6 431 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 ANKS1BQ7Z6G8 1248 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 MFN1Q8IWA4 741 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 MAML2Q8IZL2 1156 aaPredicted RBP16.34■□□□□ 0.21
CHD3-215ENST00000572750 SPEM1Q8N4L4 309 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 CCDC185Q8N715 623 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 USP33Q8TEY7 942 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 ARHGEF26Q96DR7 871 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 NHEJ1Q9H9Q4 299 aaPredicted RBP16.34■□□□□ 0.21
CHD3-215ENST00000572750 PRMT8Q9NR22 394 aaPredicted RBP16.34■□□□□ 0.21
CHD3-215ENST00000572750 SPTLC3Q9NUV7 552 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 FBXO10Q9UK96 956 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 SCINQ9Y6U3 715 aa16.34■□□□□ 0.21
CHD3-215ENST00000572750 WDFY3Q8IZQ1 3526 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 AKR1B10O60218 316 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 HOXB3P14651 431 aaPredicted RBP16.33■□□□□ 0.2
CHD3-215ENST00000572750 PSMA2P25787 234 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 HOXC13P31276 330 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 KIR2DL1P43626 348 aaPredicted RBP16.33■□□□□ 0.2
CHD3-215ENST00000572750 CDH18Q13634 790 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 AUHQ13825 339 aaKnown RBP16.33■□□□□ 0.2
CHD3-215ENST00000572750 PREPLQ4J6C6 727 aaPredicted RBP16.33■□□□□ 0.2
CHD3-215ENST00000572750 EMC10Q5UCC4 262 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 EGFLAMQ63HQ2 1017 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 FBXL22Q6P050 247 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 TSSK4Q6SA08 328 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 C14orf80Q86SX3 495 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 CARNMT1Q8N4J0 409 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 ALLCQ8N6M5 410 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 SUMF1Q8NBK3 374 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 RUBCNQ92622 972 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 CENPIQ92674 756 aaPredicted RBP16.33■□□□□ 0.2
CHD3-215ENST00000572750 IGSF8Q969P0 613 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 RPRD1AQ96P16 312 aaPredicted RBP16.33■□□□□ 0.2
CHD3-215ENST00000572750 CNPY3Q9BT09 278 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 PACSIN1Q9BY11 444 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 ABCB8Q9NUT2 735 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 SLC27A6Q9Y2P4 619 aa16.33■□□□□ 0.2
CHD3-215ENST00000572750 A0A0A0MRY4 1105 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 TMEM191CA6NGB0 347 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 LUC7L3O95232 432 aaKnown RBP16.32■□□□□ 0.2
CHD3-215ENST00000572750 CD70P32970 193 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 TNFRSF4P43489 277 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 CCR3P51677 355 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 MTA1Q13330 715 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 RABGAP1LQ5R372 815 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 MPP7Q5T2T1 576 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 DOCK4Q8N1I0 1966 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 CCDC33Q8N5R6 958 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 ZNF513Q8N8E2 541 aaPredicted RBP16.32■□□□□ 0.2
CHD3-215ENST00000572750 ACDQ96AP0 544 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 CCDC42Q96M95 316 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 HINFPQ9BQA5 517 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 SLC2A11Q9BYW1 496 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 IRX2Q9BZI1 471 aaPredicted RBP16.32■□□□□ 0.2
CHD3-215ENST00000572750 GGA2Q9UJY4 613 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 HCN2Q9UL51 889 aa16.32■□□□□ 0.2
CHD3-215ENST00000572750 A0A1B0GVM2 712 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 TCAF2A6NFQ2 919 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 CHURC1-FNTBB4DL54 471 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 KLF8O95600 359 aaPredicted RBP16.31■□□□□ 0.2
CHD3-215ENST00000572750 CYP1A2P05177 515 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 NUMBP49757 651 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 GALCP54803 685 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 CSTF1Q05048 431 aaKnown RBP16.31■□□□□ 0.2
CHD3-215ENST00000572750 FUT11Q495W5 492 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 FSCBQ5H9T9 825 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 TTC39BQ5VTQ0 682 aaPredicted RBP16.31■□□□□ 0.2
CHD3-215ENST00000572750 TMEM215Q68D42 235 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 SCYL2Q6P3W7 929 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 NUDT18Q6ZVK8 323 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 ZNF683Q8IZ20 524 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 CCAR2Q8N163 923 aaKnown RBP16.31■□□□□ 0.2
CHD3-215ENST00000572750 IL17RCQ8NAC3 791 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 TXNDC5Q8NBS9 432 aaKnown RBP16.31■□□□□ 0.2
CHD3-215ENST00000572750 SORCS1Q8WY21 1168 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 HHIPQ96QV1 700 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 NUP85Q9BW27 656 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 CIPCQ9C0C6 399 aa16.31■□□□□ 0.2
CHD3-215ENST00000572750 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
CHD3-215ENST00000572750 MYO18AQ92614 2054 aaKnown RBP16.3■□□□□ 0.2
CHD3-215ENST00000572750 E9PAM4 449 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms