RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 C18orf8Q96DM3 657 aa9□□□□□ -0.97
SMG6-210ENST00000572205 ALG14Q96F25 216 aa9□□□□□ -0.97
SMG6-210ENST00000572205 TBCBQ99426 244 aa9□□□□□ -0.97
SMG6-210ENST00000572205 C11orf70Q9BRQ4 267 aa9□□□□□ -0.97
SMG6-210ENST00000572205 SLC2A11Q9BYW1 496 aa9□□□□□ -0.97
SMG6-210ENST00000572205 TMEM245Q9H330 911 aa9□□□□□ -0.97
SMG6-210ENST00000572205 METTL5Q9NRN9 209 aaKnown RBP9□□□□□ -0.97
SMG6-210ENST00000572205 CACNA2D2Q9NY47 1150 aa9□□□□□ -0.97
SMG6-210ENST00000572205 AIPL1Q9NZN9 384 aa9□□□□□ -0.97
SMG6-210ENST00000572205 THAP10Q9P2Z0 257 aaPredicted RBP9□□□□□ -0.97
SMG6-210ENST00000572205 OR51B4Q9Y5P0 310 aa9□□□□□ -0.97
SMG6-210ENST00000572205 HS3ST4Q9Y661 456 aa9□□□□□ -0.97
SMG6-210ENST00000572205 IGLV3-10A0A075B6K4 115 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 A0A1W2PQJ5 194 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 SMTNL1A8MU46 457 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 WASH3PC4AMC7 463 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 DDX3XO00571 662 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMG6-210ENST00000572205 DCLK1O15075 740 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 APBB3O95704 486 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 MOCS2O96007 188 aaPredicted RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 LMNAP02545 664 aaKnown RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 TACR2P21452 398 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 HARS2P49590 506 aaKnown RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 ZNF445P59923 1031 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 LMAN2Q12907 356 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 EIF4HQ15056 248 aaKnown RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 MAP7D1Q3KQU3 841 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 SLC25A52Q3SY17 297 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 CCDC14Q49A88 953 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 MPPE1Q53F39 396 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 FAM102AQ5T9C2 384 aaPredicted RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 RAP1GAP2Q684P5 730 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 HEATR6Q6AI08 1181 aaKnown RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 ZC3H14Q6PJT7 736 aaKnown RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 TRIM72Q6ZMU5 477 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 UNC45BQ8IWX7 931 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 DCLK2Q8N568 766 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 HJURPQ8NCD3 748 aaPredicted RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 C3orf20Q8ND61 904 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 IPO4Q8TEX9 1081 aaKnown RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 GAB3Q8WWW8 586 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 BTN2A3PQ96KV6 586 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 CFAP57Q96MR6 1250 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 XPO6Q96QU8 1125 aaKnown RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 SPAG5Q96R06 1193 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 AGPAT1Q99943 283 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 TRIM62Q9BVG3 475 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 TPSD1Q9BZJ3 242 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 SLC6A17Q9H1V8 727 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 SEMA4AQ9H3S1 761 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 FAM204AQ9H8W3 233 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 ABCB8Q9NUT2 735 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 DDIT4Q9NX09 232 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 MBD1Q9UIS9 605 aaPredicted RBP8.99□□□□□ -0.97
SMG6-210ENST00000572205 SNX10Q9Y5X0 201 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 RAD54BQ9Y620 910 aa8.99□□□□□ -0.97
SMG6-210ENST00000572205 LRRK1Q38SD2 2015 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 NCOR2Q9Y618 2525 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 M0QYT0 321 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 TBL1XO60907 577 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 ATG13O75143 517 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 PAGE1O75459 146 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 LUC7L3O95232 432 aaKnown RBP8.98□□□□□ -0.97
SMG6-210ENST00000572205 PLEKP08567 350 aaPredicted RBP8.98□□□□□ -0.97
SMG6-210ENST00000572205 HOXB2P14652 356 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 PTMSP20962 102 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 NTSR1P30989 418 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 P2RY2P41231 377 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 WASP42768 502 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 PTPN9P43378 593 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 DGKEP52429 567 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 HDAC4P56524 1084 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 ZNF234Q14588 700 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 C15orf59Q2T9L4 293 aaPredicted RBP8.98□□□□□ -0.97
SMG6-210ENST00000572205 ALFQ53S48 1182 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 TMEM164Q5U3C3 297 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 ANO7Q6IWH7 933 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 FBXL22Q6P050 247 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 LRSAM1Q6UWE0 723 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 KBTBD6Q86V97 674 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 ERICH1Q86X53 443 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 CFAP52Q8N1V2 620 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 FAM160A2Q8N612 972 aaPredicted RBP8.98□□□□□ -0.97
SMG6-210ENST00000572205 ARFGAP1Q8N6T3 406 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 FIBINQ8TAL6 211 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 DDI1Q8WTU0 396 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 TTC17Q96AE7 1141 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 ZC3H10Q96K80 434 aaKnown RBP8.98□□□□□ -0.97
SMG6-210ENST00000572205 NOX5Q96PH1 765 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 MAGEB5Q9BZ81 275 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 TRIM7Q9C029 511 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 XPO4Q9C0E2 1151 aaKnown RBP8.98□□□□□ -0.97
SMG6-210ENST00000572205 MKRN2Q9H000 416 aaKnown RBP8.98□□□□□ -0.97
SMG6-210ENST00000572205 DUSP15Q9H1R2 295 aaPredicted RBP8.98□□□□□ -0.97
SMG6-210ENST00000572205 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.98□□□□□ -0.97
SMG6-210ENST00000572205 GGA2Q9UJY4 613 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 STON1Q9Y6Q2 735 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 ITIH6Q6UXX5 1313 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 FRYQ5TBA9 3013 aa8.98□□□□□ -0.97
SMG6-210ENST00000572205 AKAP13Q12802 2813 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms