RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 P2RY11Q96G91 374 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 C1orf74Q96LT6 269 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 LGMNQ99538 433 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 SIK2Q9H0K1 926 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 STMN4Q9H169 189 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 CENPHQ9H3R5 247 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 CATSPERBQ9H7T0 1116 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 FNIP2Q9P278 1114 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 BCCIPQ9P287 314 aaKnown RBP eCLIP6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 IGSF9Q9P2J2 1179 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 NUDT5Q9UKK9 219 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 NOVA2Q9UNW9 492 aaKnown RBP6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 NEU3Q9UQ49 428 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 TEX264Q9Y6I9 313 aa6.32□□□□□ -1.4
TRAPPC1-204ENST00000571947 CLUHO75153 1309 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 SMIM23A6NLE4 172 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 A6NNZ2 444 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 E7EVH7 732 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 RNF103O00237 685 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 OPHN1O60890 802 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 SHOX2O60902 331 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 BANF1O75531 89 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 SEC24AO95486 1093 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 APOEP02649 317 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 URODP06132 367 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 GSTA2P09210 222 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 CSH1P0DML2 217 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 CSH2P0DML3 217 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 HSPA1AP0DMV8 641 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 HSPA1BP0DMV9 641 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 PTPN3P26045 913 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 PHBP35232 272 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 PPM1AP35813 382 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 GARSP41250 739 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 KPNA1P52294 538 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 GPX6P59796 221 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 MAGOHP61326 146 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 PPP2R2AP63151 447 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 HTRA4P83105 476 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 CDK16Q00536 496 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 RING1Q06587 406 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 EFEMP1Q12805 493 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 MTA1Q13330 715 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 PPIGQ13427 754 aaKnown RBP eCLIP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 FASTKD3Q14CZ7 662 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 RASA2Q15283 850 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 LONRF1Q17RB8 773 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 PARP6Q2NL67 630 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 BBS9Q3SYG4 887 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 TUBB8Q3ZCM7 444 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 CCDC38Q502W7 563 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 C10orf120Q5SQS8 335 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 ACBD5Q5T8D3 534 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 FAXCQ5TGI0 409 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 PIK3R6Q5UE93 754 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 SNX30Q5VWJ9 437 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 C16orf59Q7L2K0 433 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 UBE2Q1Q7Z7E8 422 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 C14orf80Q86SX3 495 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 CAND1Q86VP6 1230 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 TDRPQ86YL5 185 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 ANKMY2Q8IV38 441 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 TP53INP2Q8IXH6 220 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 ZNF683Q8IZ20 524 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 ZNF567Q8N184 647 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 CCDC33Q8N5R6 958 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 NPWQ8N729 165 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 ATP11CQ8NB49 1132 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 NETO2Q8NC67 525 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 CCNYQ8ND76 341 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 FBXO36Q8NEA4 188 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 PDZD8Q8NEN9 1154 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 LRRC39Q96DD0 335 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 TSGA13Q96PP4 275 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 CDK5RAP1Q96SZ6 601 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 VAT1Q99536 393 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 WDR83Q9BRX9 315 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 VPS37BQ9H9H4 285 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 PPCSQ9HAB8 311 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 EIF2B3Q9NR50 452 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 EURLQ9NYK6 297 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 MARCH2Q9P0N8 246 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 PPARGC1AQ9UBK2 798 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 STK39Q9UEW8 545 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 FETUBQ9UGM5 382 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 LGALS13Q9UHV8 139 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 SLC12A6Q9UHW9 1150 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 TRHDEQ9UKU6 1024 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 MAFFQ9ULX9 164 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 HBS1LQ9Y450 684 aaKnown RBP6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 HS3ST4Q9Y661 456 aa6.31□□□□□ -1.4
TRAPPC1-204ENST00000571947 SCN8AQ9UQD0 1980 aa6.3□□□□□ -1.4
TRAPPC1-204ENST00000571947 IGLV3-10A0A075B6K4 115 aa6.3□□□□□ -1.4
TRAPPC1-204ENST00000571947 SLC12A8A0AV02 714 aa6.3□□□□□ -1.4
TRAPPC1-204ENST00000571947 E9PAM4 449 aa6.3□□□□□ -1.4
TRAPPC1-204ENST00000571947 C2CD2LO14523 706 aa6.3□□□□□ -1.4
TRAPPC1-204ENST00000571947 PSMD3O43242 534 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms