RNA–Protein interactions for RNA: ENST00000571881.2

CLDN7-204, Transcript of claudin 7, human

TSL 3 BASIC

Gene CLDN7, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDN7-204	ENST00000571881	AUH	Q13825	339 aa	Known RBP	18.92	■□□□□ 0.62
CLDN7-204	ENST00000571881	E2F5	Q15329	346 aa		18.92	■□□□□ 0.62
CLDN7-204	ENST00000571881	USP39	Q53GS9	565 aa	Known RBP	18.92	■□□□□ 0.62
CLDN7-204	ENST00000571881	KIAA1324	Q6UXG2	1013 aa	Known RBP	18.92	■□□□□ 0.62
CLDN7-204	ENST00000571881	CACUL1	Q86Y37	369 aa		18.92	■□□□□ 0.62
CLDN7-204	ENST00000571881	DNAAF5	Q86Y56	855 aa		18.92	■□□□□ 0.62
CLDN7-204	ENST00000571881	MCOLN2	Q8IZK6	566 aa		18.92	■□□□□ 0.62
CLDN7-204	ENST00000571881	PLA2G4C	Q9UP65	541 aa		18.92	■□□□□ 0.62
CLDN7-204	ENST00000571881	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
CLDN7-204	ENST00000571881	NUP205	Q92621	2012 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	CCDC163	A0A0D9SF12	145 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881		A0A1W2PQJ5	194 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	ATP5B	P06576	529 aa	Known RBP	18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	EPHX1	P07099	455 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	TPM1	P09493	284 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	CHRM1	P11229	460 aa	Predicted RBP	18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	RRM1	P23921	792 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	HOXD11	P31277	338 aa	Predicted RBP	18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	ZBED6	P86452	979 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	FUT11	Q495W5	492 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	TTC39B	Q5VTQ0	682 aa	Predicted RBP	18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	TMEM215	Q68D42	235 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	KIAA1211L	Q6NV74	962 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	PPP1R2P3	Q6NXS1	205 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	FBXL22	Q6P050	247 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	LRRC31	Q6UY01	552 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	VPS36	Q86VN1	386 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	CCAR2	Q8N163	923 aa	Known RBP	18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	ZNF366	Q8N895	744 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	SUMF1	Q8NBK3	374 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	FIBIN	Q8TAL6	211 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	RLN3	Q8WXF3	142 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	IQCD	Q96DY2	449 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	SPACA7	Q96KW9	195 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	PRMT1	Q99873	361 aa	Known RBP	18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	ARHGEF38	Q9NXL2	777 aa		18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	THAP10	Q9P2Z0	257 aa	Predicted RBP	18.91	■□□□□ 0.62
CLDN7-204	ENST00000571881	SDK1	Q7Z5N4	2213 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881		A0A1B0GVM2	712 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	TCAF2	A6NFQ2	919 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	C2CD4B	A6NLJ0	364 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	DCLK1	O15075	740 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	TIMM44	O43615	452 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	SRGAP2	O75044	1071 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	GYPC	P04921	128 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	HLA-E	P13747	358 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	PRKCH	P24723	683 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	CASP14	P31944	242 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	RFC1	P35251	1148 aa	Predicted RBP	18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	PRKCI	P41743	596 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	IRAK1	P51617	712 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	ST8SIA6	P61647	398 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	ARL13B	Q3SXY8	428 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	CCDC14	Q49A88	953 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	RAB6C	Q53S08	254 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	FSCB	Q5H9T9	825 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	SH3PXD2A	Q5TCZ1	1133 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	RNF219	Q5W0B1	726 aa	Predicted RBP	18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	C14orf80	Q86SX3	495 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	ABCA7	Q8IZY2	2146 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	DCLK2	Q8N568	766 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	FAM172A	Q8WUF8	416 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	IGSF8	Q969P0	613 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	NT5C3B	Q969T7	300 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	ZNF653	Q96CK0	615 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	PGAP3	Q96FM1	320 aa	Predicted RBP	18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	RAB6C	Q9H0N0	254 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	SLC6A17	Q9H1V8	727 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	ANLN	Q9NQW6	1124 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	KIAA1522	Q9P206	1035 aa	Predicted RBP	18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	MYO1A	Q9UBC5	1043 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	EBF1	Q9UH73	591 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	CAPN11	Q9UMQ6	739 aa		18.9	■□□□□ 0.62
CLDN7-204	ENST00000571881	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	SIGLEC16	A6NMB1	481 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	DDX3X	O00571	662 aa	Known RBP eCLIP	18.89	■□□□□ 0.61	4e-13	■■■■■ 31.5
CLDN7-204	ENST00000571881	NPC1	O15118	1278 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	MAP3K13	O43283	966 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	GABRG2	P18507	467 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	CSK	P41240	450 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	GSC	P56915	257 aa	Predicted RBP	18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	ZNF177	Q13360	481 aa	Predicted RBP	18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	ELF2	Q15723	593 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	PITRM1	Q5JRX3	1037 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	LAIR1	Q6GTX8	287 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	SCYL2	Q6P3W7	929 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	WDR59	Q6PJI9	974 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	ARC	Q7LC44	396 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	ADIPOR2	Q86V24	386 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	KBTBD6	Q86V97	674 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	RASSF3	Q86WH2	238 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	FAM160A2	Q8N612	972 aa	Predicted RBP	18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	RUBCN	Q92622	972 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	GABRG3	Q99928	467 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	SYT11	Q9BT88	431 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881	ITIH6	Q6UXX5	1313 aa		18.89	■□□□□ 0.61
CLDN7-204	ENST00000571881		A0A1W2PQF6	199 aa		18.88	■□□□□ 0.61
CLDN7-204	ENST00000571881	CCP110	O43303	1012 aa		18.88	■□□□□ 0.61
CLDN7-204	ENST00000571881	FTL	P02792	175 aa	Predicted RBP	18.88	■□□□□ 0.61

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