RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 NPNTQ6UXI9 565 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 ZDHHC14Q8IZN3 488 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 CELF5Q8N6W0 485 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 PLD5Q8N7P1 536 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 SPATA4Q8NEY3 305 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 RIN3Q8TB24 985 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 C1orf54Q8WWF1 131 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 IGSF8Q969P0 613 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 PRICKLE1Q96MT3 831 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 ASB16Q96NS5 453 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 MYADMQ96S97 322 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 ZYG11BQ9C0D3 744 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 RBM12Q9NTZ6 932 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 MPP6Q9NZW5 540 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 PPARGC1AQ9UBK2 798 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 NR2E1Q9Y466 385 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 MFHAS1Q9Y4C4 1052 aa15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 HELZP42694 1942 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-219ENST00000570273 IGLV3-10A0A075B6K4 115 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 TSPAN3O60637 253 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 SLU7O95391 586 aaKnown RBP15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 PECAM1P16284 738 aaPredicted RBP15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 RHOQP17081 205 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 KCNA5P22460 613 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 IRAK1P51617 712 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 CIR1Q86X95 450 aaPredicted RBP15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 PRELID2Q8N945 189 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 TTC13Q8NBP0 860 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 ATG4AQ8WYN0 398 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 MYEOVQ96EZ4 313 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 RPGRIP1Q96KN7 1286 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 FAM118BQ9BPY3 351 aa15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 SPTBN5Q9NRC6 3674 aaKnown RBP15.88■□□□□ 0.13
HERPUD1-219ENST00000570273 TYW5A2RUC4 315 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 DRGXA6NNA5 263 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 CCDC188H7C350 402 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 MFSD11O43934 449 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 PHF2O75151 1096 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 SERPINB6P35237 376 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 VIPR2P41587 438 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 OTUD4Q01804 1114 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 ARTNQ5T4W7 220 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 TFAP2DQ7Z6R9 452 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 KLHL7Q8IXQ5 586 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 FAM217AQ8IXS0 508 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 CFAP52Q8N1V2 620 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 RTL3Q8N8U3 475 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 HJURPQ8NCD3 748 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 LRRN4CLQ8ND94 238 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 ACTL9Q8TC94 416 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 SUSD6Q92537 303 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 P3H4Q92791 437 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 RSPRY1Q96DX4 576 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 SAE1Q9UBE0 346 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 HEY1Q9Y5J3 304 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 UNC80Q8N2C7 3258 aa15.87■□□□□ 0.13
HERPUD1-219ENST00000570273 MCF2LO15068 1137 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 CNTN5O94779 1100 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 CHKAP35790 457 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 SGSHP51688 502 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 RPS24P62847 133 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 GBE1Q04446 702 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 SMAD4Q13485 552 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 PAFAH1B3Q15102 231 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 NOMO1Q15155 1222 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 C5orf22Q49AR2 442 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 ALFQ53S48 1182 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 TTC39BQ5VTQ0 682 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 NLRP14Q86W24 1093 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 CPXM2Q8N436 756 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 TDRD5Q8NAT2 981 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 MAGOHBQ96A72 148 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 FRMD8P1Q9BZ68 369 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 DDX47Q9H0S4 455 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 TRPV4Q9HBA0 871 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 HOMER3Q9NSC5 361 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 TMEM248Q9NWD8 314 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 TBC1D14Q9P2M4 693 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 WNT6Q9Y6F9 365 aa15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 ZFP37Q9Y6Q3 630 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 NUP210Q8TEM1 1887 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-219ENST00000570273 GRXCR2A6NFK2 248 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 HEPACAM2A8MVW5 462 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 WASH4PA8MWX3 477 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 SLC9A3R1O14745 358 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 TBL1XO60907 577 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 MAP3K6O95382 1288 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 FCARP24071 287 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 EIF3EP60228 445 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 SNX1Q13596 522 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 CCNG2Q16589 344 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 CYP1B1Q16678 543 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 NPWQ8N729 165 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 C12orf50Q8NA57 414 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 BPIFB1Q8TDL5 484 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 CELF6Q96J87 481 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 KRT12Q99456 494 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 OBP2AQ9NY56 170 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 DONSONQ9NYP3 566 aa15.85■□□□□ 0.13
HERPUD1-219ENST00000570273 DTLQ9NZJ0 730 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms