RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	RASSF3	Q86WH2	238 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	CARNMT1	Q8N4J0	409 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	CCDC33	Q8N5R6	958 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	CPLX3	Q8WVH0	158 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	GAB3	Q8WWW8	586 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	NTAN1	Q96AB6	310 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	LOXL4	Q96JB6	756 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	ISCU	Q9H1K1	167 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	DEF6	Q9H4E7	631 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	STIM2	Q9P246	746 aa		18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	PPARGC1A	Q9UBK2	798 aa	Known RBP	18.57	■□□□□ 0.56
PKD1-238	ENST00000570150	CXorf51A	A0A1B0GTR3	108 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	GOLGA6L7	A0A1B0GV03	622 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	PRRT4	C9JH25	899 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	RPP40	O75818	363 aa	Known RBP	18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	RNF8	O76064	485 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	SRPRA	P08240	638 aa	Known RBP	18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	HLA-F	P30511	346 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	RFC1	P35251	1148 aa	Predicted RBP	18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	ATP11A	P98196	1134 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	ENPP2	Q13822	863 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	ELF2	Q15723	593 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	SPDYC	Q5MJ68	293 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	C6orf118	Q5T5N4	469 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	LAIR1	Q6GTX8	287 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	PLEKHA7	Q6IQ23	1121 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	FBXL22	Q6P050	247 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	TSSK4	Q6SA08	328 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	TTC17	Q96AE7	1141 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	PRICKLE1	Q96MT3	831 aa	Predicted RBP	18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	DNAJC7	Q99615	494 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	OSBPL2	Q9H1P3	480 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	ADAMTS1	Q9UHI8	967 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	GMEB2	Q9UKD1	530 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	HS3ST4	Q9Y661	456 aa		18.56	■□□□□ 0.56
PKD1-238	ENST00000570150	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	COL4A3	Q01955	1670 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	SSU72P8	A0A1W2PR75	194 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	PRR23A	A6NEV1	266 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	SGK1	O00141	431 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	RHOBTB1	O94844	696 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	ADRA1B	P35368	520 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	FNTB	P49356	437 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	VASP	P50552	380 aa	Predicted RBP	18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	PLK1	P53350	603 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	RPS24	P62847	133 aa	Known RBP	18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	PITX1	P78337	314 aa	Predicted RBP	18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	KRT83	P78385	493 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	SCAP	Q12770	1279 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	MAMLD1	Q13495	774 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	SIM2	Q14190	667 aa	Predicted RBP	18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	ARID5B	Q14865	1188 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	GEN1	Q17RS7	908 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	CCDC14	Q49A88	953 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	C2CD6	Q53TS8	623 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	EFHC2	Q5JST6	749 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	MBLAC2	Q68D91	279 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	WDR59	Q6PJI9	974 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	CCAR2	Q8N163	923 aa	Known RBP	18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	FAM172A	Q8WUF8	416 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	RUBCN	Q92622	972 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	MCEE	Q96PE7	176 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	HHIP	Q96QV1	700 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	SIK2	Q9H0K1	926 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	STON1	Q9Y6Q2	735 aa		18.55	■□□□□ 0.56
PKD1-238	ENST00000570150	LRP3	O75074	770 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	ADCY5	O95622	1261 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	RRM1	P23921	792 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	ZBTB16	Q05516	673 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	FNDC3B	Q53EP0	1204 aa	Known RBP	18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	PPP1R15B	Q5SWA1	713 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	EGFLAM	Q63HQ2	1017 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	HGSNAT	Q68CP4	663 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	ANO7	Q6IWH7	933 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	PKN3	Q6P5Z2	889 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	SLC36A4	Q6YBV0	504 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	SLFN11	Q7Z7L1	901 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	METTL3	Q86U44	580 aa	Known RBP	18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	PSTK	Q8IV42	348 aa	Known RBP	18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	PGBD3	Q8N328	593 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	EMC1	Q8N766	993 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	ZNF653	Q96CK0	615 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	C2orf49	Q9BVC5	232 aa	Predicted RBP	18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	ZYG11B	Q9C0D3	744 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	LUC7L	Q9NQ29	371 aa	Known RBP	18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	CNOT8	Q9UFF9	292 aa	Known RBP	18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	OR12D3	Q9UGF7	316 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	VANGL2	Q9ULK5	521 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	TBC1D30	Q9Y2I9	924 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150		R4GN57	208 aa		18.54	■□□□□ 0.56
PKD1-238	ENST00000570150	IGLV3-10	A0A075B6K4	115 aa		18.53	■□□□□ 0.56
PKD1-238	ENST00000570150	TCRBV5S1A1T	A0A578	114 aa		18.53	■□□□□ 0.56
PKD1-238	ENST00000570150	TCRBV21S2A2	A0A5A6	115 aa		18.53	■□□□□ 0.56
PKD1-238	ENST00000570150	DRGX	A6NNA5	263 aa		18.53	■□□□□ 0.56
PKD1-238	ENST00000570150	TMCO5B	A8MYB1	307 aa		18.53	■□□□□ 0.56
PKD1-238	ENST00000570150	DDX3X	O00571	662 aa	Known RBP eCLIP	18.53	■□□□□ 0.56
PKD1-238	ENST00000570150	RNASEH1	O60930	286 aa	Known RBP	18.53	■□□□□ 0.56
PKD1-238	ENST00000570150	ADAM23	O75077	832 aa		18.53	■□□□□ 0.56
PKD1-238	ENST00000570150	ECT2L	Q008S8	904 aa		18.53	■□□□□ 0.56
PKD1-238	ENST00000570150	MESP2	Q0VG99	397 aa		18.53	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms