RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 MOCS1Q9NZB8 636 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 IL37Q9NZH6 218 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 SAMD15Q9P1V8 674 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 IGSF9Q9P2J2 1179 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 KANSL3Q9P2N6 904 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 TBK1Q9UHD2 729 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 TRHDEQ9UKU6 1024 aa5.55□□□□□ -1.52
SF3B3-213ENST00000569687 USP15Q9Y4E8 981 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 TRIP12Q14669 1992 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-213ENST00000569687 A0A1W2PPM1 405 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 MAGEB16A2A368 324 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 FAM159BA6NKW6 160 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 FOXO6A8MYZ6 492 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 EEF2KO00418 725 aaKnown RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 DNM1LO00429 736 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 TNFRSF10BO14763 440 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 CAPN9O14815 690 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 CACNG3O60359 315 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 AVILO75366 819 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 BANF1O75531 89 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 B3GAT3O94766 335 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 STK10O94804 968 aaKnown RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 SUN1O94901 812 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 IL1BP01584 269 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 APOEP02649 317 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 MT-ND3P03897 115 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 INHAP05111 366 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 APRTP07741 180 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 GSTA1P08263 222 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 SNRPAP09012 282 aaKnown RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 CTSHP09668 335 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 USP17L7P0C7H9 530 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 DHRS4L1P0CG22 281 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 CKBP12277 381 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 MX2P20592 715 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 CNTFP26441 200 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 RPA3P35244 121 aaPredicted RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PBX2P40425 430 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 SERPINB9P50453 376 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 CDK7P50613 346 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 MMP16P51512 607 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 CACNA2D1P54289 1103 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 NRLP54845 237 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PITX1P78337 314 aaPredicted RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 NRG1Q02297 640 aaPredicted RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PPIDQ08752 370 aaKnown RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 COL19A1Q14993 1142 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 TMED2Q15363 201 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 MTFR1Q15390 333 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 SLC1A5Q15758 541 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PDK4Q16654 411 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 GALNTL6Q49A17 601 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 STXBP5Q5T5C0 1151 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 TTC39BQ5VTQ0 682 aaPredicted RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 ARMC3Q5W041 872 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 BSPRYQ5W0U4 402 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 RNF43Q68DV7 783 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 LHX8Q68G74 356 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 HEATR6Q6AI08 1181 aaKnown RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PTCRAQ6ISU1 281 aaPredicted RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 CCDC121Q6ZUS5 278 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 ZNF534Q76KX8 674 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 LRRTM3Q86VH5 581 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 LRRC6Q86X45 466 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 RGL4Q8IZJ4 473 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PYROXD2Q8N2H3 581 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 GBP7Q8N8V2 638 aaPredicted RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 RNF169Q8NCN4 708 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 DPF3Q92784 378 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 MYLPFQ96A32 169 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 MTBPQ96DY7 904 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 P2RY11Q96G91 374 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 C1orf74Q96LT6 269 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 TSGA13Q96PP4 275 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 HAPLN3Q96S86 360 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PAFAH2Q99487 392 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 VAT1Q99536 393 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 SPSB2Q99619 263 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PAAF1Q9BRP4 392 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 FTHL17Q9BXU8 183 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PRDM12Q9H4Q4 367 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 WDCPQ9H6R7 721 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 ELAC1Q9H777 363 aaKnown RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PLAC1Q9HBJ0 212 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 DMAP1Q9NPF5 467 aaPredicted RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 TMEM30AQ9NV96 361 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 HAUS2Q9NVX0 235 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 ARHGEF38Q9NXL2 777 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 ZC3H7BQ9UGR2 993 aaKnown RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 ARL2BPQ9Y2Y0 163 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 STARD13Q9Y3M8 1113 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 TTLL3Q9Y4R7 772 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 PCDHA11Q9Y5I1 949 aa5.54□□□□□ -1.52
SF3B3-213ENST00000569687 TIMM13Q9Y5L4 95 aaPredicted RBP5.54□□□□□ -1.52
SF3B3-213ENST00000569687 COL4A4P53420 1690 aaPredicted RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 BRCA2P51587 3418 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 CASTOR2A6NHX0 329 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 ERI2A8K979 691 aaKnown RBP5.53□□□□□ -1.52
SF3B3-213ENST00000569687 KCNU1A8MYU2 1149 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 KBTBD13C9JR72 458 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms