RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SYCP2LQ5T4T6 812 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 OTUD1Q5VV17 481 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 RAP1GAP2Q684P5 730 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 BEND5Q7L4P6 421 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 RABEPKQ7Z6M1 372 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 CIR1Q86X95 450 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 MFN1Q8IWA4 741 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 UNC45BQ8IWX7 931 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 SHC3Q92529 594 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 SERPINB11Q96P15 392 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 PRMT1Q99873 361 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 NUP58Q9BVL2 599 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 NFE2L3Q9Y4A8 694 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 FAM208BQ5VWN6 2430 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 A0A1B0GVT2 93 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 BCAT2O15382 392 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 THAP12O43422 761 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 CBFA2T3O75081 653 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 SIN3BO75182 1162 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 LUC7L3O95232 432 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 TRUB2O95900 331 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 SYPP08247 313 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 TACR2P21452 398 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 PON1P27169 355 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 OXTRP30559 389 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 GNA15P30679 374 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 ARID5AQ03989 594 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 MEA1Q16626 185 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 ARHGAP44Q17R89 818 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 PITRM1Q5JRX3 1037 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 PASD1Q8IV76 773 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 APCDD1Q8J025 514 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 LGI2Q8N0V4 545 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 CARNMT1Q8N4J0 409 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 HDDC3Q8N4P3 179 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 OR52K2Q8NGK3 314 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 GBP4Q96PP9 640 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 SLC2A13Q96QE2 648 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 IRX2Q9BZI1 471 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 RSPH9Q9H1X1 276 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 SUSD2Q9UGT4 822 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 SLCO3A1Q9UIG8 710 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 PLA2G4CQ9UP65 541 aa14.34□□□□□ -0.11
GTF3C1-211ENST00000569653 DOCK4Q8N1I0 1966 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 TTC34A8MYJ7 566 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 KCNU1A8MYU2 1149 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 I6L893 689 aaPredicted RBP14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 IGHV4-34P06331 123 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 VAV1P15498 845 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 GNSP15586 552 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 POLR2EP19388 210 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 GGCXP38435 758 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 ACADSBP45954 432 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 CSNK1EP49674 416 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 STK19P49842 368 aaPredicted RBP14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 METAP1P53582 386 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 HNRNPA1L2Q32P51 320 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 ARTNQ5T4W7 220 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 C9orf64Q5T6V5 341 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 NAXDQ8IW45 347 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 DHX40Q8IX18 779 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 CHCHD4Q8N4Q1 142 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 KDF1Q8NAX2 398 aaPredicted RBP14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 GOLGA1Q92805 767 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 BIRC7Q96CA5 298 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 SLC32A1Q9H598 525 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 EBF2Q9HAK2 575 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 POPDC2Q9HBU9 364 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 ANLNQ9NQW6 1124 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 APEX2Q9UBZ4 518 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 ERVW-1Q9UQF0 538 aa14.33□□□□□ -0.12
GTF3C1-211ENST00000569653 LAMA5O15230 3695 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 FAM170AA1A519 330 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 GRAP2O75791 330 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 SEMA4FO95754 770 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 ERBB2P04626 1255 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 CAPNS1P04632 268 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 ATP5BP06576 529 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 ACADMP11310 421 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 TFE3P19532 575 aaPredicted RBP14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 MZF1P28698 734 aaPredicted RBP14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 CLCN1P35523 988 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 USP8P40818 1118 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 YWHAZP63104 245 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 CENPCQ03188 943 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 KIF19Q2TAC6 998 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 HLA-BQ31612 363 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 DPCR1Q3MIW9 517 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 PTPN20Q4JDL3 420 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 MIIPQ5JXC2 388 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 CXorf57Q6NSI4 855 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 OLFML1Q6UWY5 402 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 FAM183BPQ6ZVS7 135 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 RAB44Q7Z6P3 723 aaPredicted RBP14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 DEFB106AQ8N104 65 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 PNPLA1Q8N8W4 532 aa14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 C1orf131Q8NDD1 294 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 BAHD1Q8TBE0 780 aaPredicted RBP14.32□□□□□ -0.12
GTF3C1-211ENST00000569653 SNX19Q92543 992 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms