RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SALL4Q9UJQ4 1053 aa16.56■□□□□ 0.24
USB1-215ENST00000569252 STOML2Q9UJZ1 356 aa16.56■□□□□ 0.24
USB1-215ENST00000569252 AP4E1Q9UPM8 1137 aa16.56■□□□□ 0.24
USB1-215ENST00000569252 SIT1Q9Y3P8 196 aa16.56■□□□□ 0.24
USB1-215ENST00000569252 HS3ST4Q9Y661 456 aa16.56■□□□□ 0.24
USB1-215ENST00000569252 MIA3Q5JRA6 1907 aa16.56■□□□□ 0.24
USB1-215ENST00000569252 GOLGA6L7A0A1B0GV03 622 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 GREM1O60565 184 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 CETN2P41208 172 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 ZNF135P52742 658 aaPredicted RBP16.55■□□□□ 0.24
USB1-215ENST00000569252 SCAPQ12770 1279 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 AUHQ13825 339 aaKnown RBP16.55■□□□□ 0.24
USB1-215ENST00000569252 DHCR24Q15392 516 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 RAB6CQ53S08 254 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 TTC39BQ5VTQ0 682 aaPredicted RBP16.55■□□□□ 0.24
USB1-215ENST00000569252 RWDD4Q6NW29 188 aaKnown RBP16.55■□□□□ 0.24
USB1-215ENST00000569252 UBL4BQ8N7F7 174 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 ZNF557Q8N988 423 aaPredicted RBP16.55■□□□□ 0.24
USB1-215ENST00000569252 TRIM58Q8NG06 486 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 TEKT4Q8WW24 435 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 BBS2Q9BXC9 721 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 RAB6CQ9H0N0 254 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 ECT2Q9H8V3 914 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 VANGL2Q9ULK5 521 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 PYCARDQ9ULZ3 195 aa16.55■□□□□ 0.24
USB1-215ENST00000569252 NUP210Q8TEM1 1887 aaPredicted RBP16.54■□□□□ 0.24
USB1-215ENST00000569252 A0A0U1RQJ8 604 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 TRDMT1O14717 391 aaKnown RBP16.54■□□□□ 0.24
USB1-215ENST00000569252 CREB3O43889 395 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 ADH5P11766 374 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 ARSAP15289 507 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 L1CAMP32004 1257 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 HTR7P34969 479 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 ARL4AP40617 200 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 SMTNL2Q2TAL5 461 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 PPP6R3Q5H9R7 873 aaPredicted RBP16.54■□□□□ 0.24
USB1-215ENST00000569252 KCNT1Q5JUK3 1230 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 LY6G5CQ5SRR4 150 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 PIK3R6Q5UE93 754 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 LRRC38Q5VT99 294 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 DAB2IPQ5VWQ8 1189 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 RFWD3Q6PCD5 774 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 TSSK4Q6SA08 328 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 NUDT18Q6ZVK8 323 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 POLNQ7Z5Q5 900 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 TMEM25Q86YD3 366 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 C1orf210Q8IVY1 113 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 CCAR2Q8N163 923 aaKnown RBP16.54■□□□□ 0.24
USB1-215ENST00000569252 ARFGAP1Q8N6T3 406 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 HJURPQ8NCD3 748 aaPredicted RBP16.54■□□□□ 0.24
USB1-215ENST00000569252 PJA1Q8NG27 643 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 TTC8Q8TAM2 541 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 RIN3Q8TB24 985 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 ATRIPQ8WXE1 791 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 DNASE1L2Q92874 299 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 MAK16Q9BXY0 300 aaKnown RBP16.54■□□□□ 0.24
USB1-215ENST00000569252 C8orf33Q9H7E9 229 aaPredicted RBP16.54■□□□□ 0.24
USB1-215ENST00000569252 TRPV5Q9NQA5 729 aa16.54■□□□□ 0.24
USB1-215ENST00000569252 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.54■□□□□ 0.24
USB1-215ENST00000569252 XPO7Q9UIA9 1087 aaKnown RBP16.54■□□□□ 0.24
USB1-215ENST00000569252 CCDC66A2RUB6 948 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 GRID2IPA4D2P6 1211 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 E9PAM4 449 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 NEDD8-MDP1E9PL57 170 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 PSTPIP1O43586 416 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 TBL1XO60907 577 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 RARAP10276 462 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 TNK2Q07912 1038 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 PDK2Q15119 407 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 FAM133BQ5BKY9 247 aaKnown RBP16.53■□□□□ 0.24
USB1-215ENST00000569252 FBXL22Q6P050 247 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 C1orf228Q6PIY5 440 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 RHBDF2Q6PJF5 856 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 REXO1L1PQ8IX06 675 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 FAM217AQ8IXS0 508 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 BHMTQ93088 406 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 TBC1D31Q96DN5 1066 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 SNRNP25Q9BV90 132 aaKnown RBP16.53■□□□□ 0.24
USB1-215ENST00000569252 RETREG1Q9H6L5 497 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 CATSPERBQ9H7T0 1116 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 SLC2A4RGQ9NR83 387 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 GTSE1Q9NYZ3 720 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 HYOU1Q9Y4L1 999 aa16.53■□□□□ 0.24
USB1-215ENST00000569252 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.52■□□□□ 0.24
USB1-215ENST00000569252 MIF4GDA9UHW6 222 aaKnown RBP16.52■□□□□ 0.24
USB1-215ENST00000569252 H0Y626 953 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 H3BRJ5 948 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 EEF2KO00418 725 aaKnown RBP16.52■□□□□ 0.24
USB1-215ENST00000569252 KRT37O76014 449 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 TYRP14679 529 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 SLC6A4P31645 630 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 CDH6P55285 790 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 TAS2R40P59535 323 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 TPI1P60174 286 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 NRG1Q02297 640 aaPredicted RBP16.52■□□□□ 0.24
USB1-215ENST00000569252 SLC25A11Q02978 314 aaKnown RBP16.52■□□□□ 0.24
USB1-215ENST00000569252 ZNF177Q13360 481 aaPredicted RBP16.52■□□□□ 0.24
USB1-215ENST00000569252 UBXN2BQ14CS0 331 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 RSPO4Q2I0M5 234 aaPredicted RBP16.52■□□□□ 0.24
USB1-215ENST00000569252 MPP7Q5T2T1 576 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms