RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 C12orf66Q96MD2 445 aa7.26□□□□□ -1.25
CNOT1-216ENST00000569240 TCEAL7Q9BRU2 100 aa7.26□□□□□ -1.25
CNOT1-216ENST00000569240 GTPBP2Q9BX10 602 aaKnown RBP7.26□□□□□ -1.25
CNOT1-216ENST00000569240 SLC22A4Q9H015 551 aa7.26□□□□□ -1.25
CNOT1-216ENST00000569240 ENTPD7Q9NQZ7 604 aa7.26□□□□□ -1.25
CNOT1-216ENST00000569240 ADCY10Q96PN6 1610 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TGM6O95932 706 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 MYL3P08590 195 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 HADHBP55084 474 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CDH4P55283 916 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CDH18Q13634 790 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TMEM44Q2T9K0 475 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 OTOAQ7RTW8 1153 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 ZDHHC17Q8IUH5 632 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 SPATA20Q8TB22 786 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TFB1MQ8WVM0 346 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 RBM4BQ9BQ04 359 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 DDX50Q9BQ39 737 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 RBM4Q9BWF3 364 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 DHX35Q9H5Z1 703 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 M0QYV0 167 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 PEX11AO75192 247 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 F9P00740 461 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 YAP1P46937 504 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CNTN1Q12860 1018 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 PTP4A2Q12974 167 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 FAM187BQ17R55 369 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 N4BP2L1Q5TBK1 243 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TWF2Q6IBS0 349 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 P2RY8Q86VZ1 359 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 ACOT12Q8WYK0 555 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 NIF3L1Q9GZT8 377 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 REEP1Q9H902 201 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CLN6Q9NWW5 311 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TBC1D30Q9Y2I9 924 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 SIK3Q9Y2K2 1263 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 PDE2AO00408 941 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 KPNA1P52294 538 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 PEX3P56589 373 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 RAB2AP61019 212 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 ADGRE1Q14246 886 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 NDUFAF6Q330K2 333 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 ANGEL2Q5VTE6 544 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 ZNF571Q7Z3V5 609 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TTC16Q8NEE8 873 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 FAR1Q8WVX9 515 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 FAM84AQ96KN4 292 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TMEM47Q9BQJ4 181 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 DNAJC11Q9NVH1 559 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 INTS13Q9NVM9 706 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TESPA1A2RU30 521 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 H7C2Y5 167 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 AGPSO00116 658 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 INPP4BO15327 924 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TSPAN19P0C672 248 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 LBPP18428 481 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 DNAJB1P25685 340 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CASP1P29466 404 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 YWHABP31946 246 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 PHKA2P46019 1235 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 POU4F1Q01851 419 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 ZNF45Q02386 682 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 GALNT18Q6P9A2 607 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 LINC00299Q6ZSB3 139 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 RASSF6Q6ZTQ3 369 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 USP43Q70EL4 1123 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 POLNQ7Z5Q5 900 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 RASAL3Q86YV0 1011 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 FITM2Q8N6M3 262 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 OR6P1Q8NGX9 317 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 FICDQ9BVA6 458 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 NXF1Q9UBU9 619 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TDRKHQ9Y2W6 561 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 IVNS1ABPQ9Y6Y0 642 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 BCORL1Q5H9F3 1711 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 NEXMIFQ5QGS0 1516 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 IQGAP3Q86VI3 1631 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CROCC2H7BZ55 1655 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 FADS2P1A8MWK0 482 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CABYRO75952 493 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 AKR1B1P15121 316 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 ATF4P18848 351 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 NFKB1P19838 968 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 PLEKHG6Q3KR16 790 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 TIGD7Q6NT04 549 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 FAM47BQ8NA70 645 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 ERLEC1Q96DZ1 483 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CAMKK2Q96RR4 588 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 FAM95CA0A1B0GW59 222 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 E9PBE3 544 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CD44P16070 742 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 UBE3AQ05086 875 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 DGKDQ16760 1214 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 PPM1LQ5SGD2 360 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 EIF5AL1Q6IS14 154 aaKnown RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 ZNF746Q6NUN9 644 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-216ENST00000569240 SPERTQ8NA61 448 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CREB3L1Q96BA8 519 aa7.25□□□□□ -1.25
CNOT1-216ENST00000569240 CATSPERBQ9H7T0 1116 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms